Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 AL355075.4-201ENST00000554988 638 ntBASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 AL121829.2-201ENST00000620908 328 ntBASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPOQ8N3V7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.61■□□□□ 0.89
SYNPOQ8N3V7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 AL353807.1-201ENST00000427475 662 ntBASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPOQ8N3V7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 TSPY15P-201ENST00000457163 923 ntBASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 AC026471.5-201ENST00000615068 467 ntBASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 FBXW4P1-201ENST00000426721 2239 ntBASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SYNPOQ8N3V7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPOQ8N3V7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNPOQ8N3V7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNPOQ8N3V7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNPOQ8N3V7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.58■□□□□ 0.88
SYNPOQ8N3V7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms