Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN20Q4JDL3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN20Q4JDL3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN20Q4JDL3 GPX1P1-201ENST00000388829 606 ntBASIC21.32■■□□□ 1
PTPN20Q4JDL3 BX276092.2-201ENST00000417668 665 ntBASIC21.32■■□□□ 1
PTPN20Q4JDL3 TSPY6P-201ENST00000448518 926 ntBASIC21.32■■□□□ 1
PTPN20Q4JDL3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.32■■□□□ 1
PTPN20Q4JDL3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.32■■□□□ 1
PTPN20Q4JDL3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN20Q4JDL3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN20Q4JDL3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN20Q4JDL3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN20Q4JDL3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.32■■□□□ 1
PTPN20Q4JDL3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PTPN20Q4JDL3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN20Q4JDL3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.31■■□□□ 1
PTPN20Q4JDL3 AC099778.1-201ENST00000568593 1911 ntBASIC21.31■■□□□ 1
PTPN20Q4JDL3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.31■■□□□ 1
PTPN20Q4JDL3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.31■■□□□ 1
PTPN20Q4JDL3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.31■■□□□ 1
PTPN20Q4JDL3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN20Q4JDL3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.31■■□□□ 1
PTPN20Q4JDL3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTPN20Q4JDL3 MIPEPP3-201ENST00000412105 444 ntBASIC21.31■■□□□ 1
PTPN20Q4JDL3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN20Q4JDL3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN20Q4JDL3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTPN20Q4JDL3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.31■■□□□ 1
PTPN20Q4JDL3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN20Q4JDL3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.31■■□□□ 1
PTPN20Q4JDL3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
PTPN20Q4JDL3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.3■■□□□ 1
PTPN20Q4JDL3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.3■■□□□ 1
PTPN20Q4JDL3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.3■■□□□ 1
PTPN20Q4JDL3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.3■■□□□ 1
PTPN20Q4JDL3 LSM12P1-201ENST00000411836 588 ntBASIC21.3■■□□□ 1
PTPN20Q4JDL3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.3■■□□□ 1
PTPN20Q4JDL3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PTPN20Q4JDL3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.3■■□□□ 1
PTPN20Q4JDL3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PTPN20Q4JDL3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN20Q4JDL3 PTBP1P-201ENST00000554374 1601 ntBASIC21.29■■□□□ 1
PTPN20Q4JDL3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN20Q4JDL3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN20Q4JDL3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.29■■□□□ 1
PTPN20Q4JDL3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PTPN20Q4JDL3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN20Q4JDL3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
PTPN20Q4JDL3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
PTPN20Q4JDL3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PTPN20Q4JDL3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.29■■□□□ 1
PTPN20Q4JDL3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.29■■□□□ 1
PTPN20Q4JDL3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN20Q4JDL3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.29■■□□□ 1
PTPN20Q4JDL3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTPN20Q4JDL3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN20Q4JDL3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN20Q4JDL3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.29■■□□□ 1
PTPN20Q4JDL3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN20Q4JDL3 AC112907.3-201ENST00000577781 2400 ntBASIC21.28■■□□□ 1
PTPN20Q4JDL3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.28■■□□□ 1
PTPN20Q4JDL3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.28■■□□□ 1
PTPN20Q4JDL3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN20Q4JDL3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.28■■□□□ 1
PTPN20Q4JDL3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN20Q4JDL3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.28■■□□□ 1
PTPN20Q4JDL3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN20Q4JDL3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN20Q4JDL3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PTPN20Q4JDL3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN20Q4JDL3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 C2orf69P4-201ENST00000565394 541 ntBASIC21.27■■□□□ 1
PTPN20Q4JDL3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.27■■□□□ 1
PTPN20Q4JDL3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.27■□□□□ 0.99
PTPN20Q4JDL3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.27■□□□□ 0.99
PTPN20Q4JDL3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PTPN20Q4JDL3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PTPN20Q4JDL3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms