Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SEC61BP60468 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SEC61BP60468 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
SEC61BP60468 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.87□□□□□ -0.67
SEC61BP60468 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SEC61BP60468 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SEC61BP60468 GXYLT1P3-201ENST00000453058 1193 ntBASIC10.87□□□□□ -0.67
SEC61BP60468 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC10.87□□□□□ -0.67
SEC61BP60468 DHDH-203ENST00000522614 776 ntTSL 5 BASIC10.87□□□□□ -0.67
SEC61BP60468 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC10.87□□□□□ -0.67
SEC61BP60468 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC10.87□□□□□ -0.67
SEC61BP60468 LINC01023-201ENST00000606054 436 ntBASIC10.87□□□□□ -0.67
SEC61BP60468 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 REXO1L12P-201ENST00000622156 912 ntBASIC10.87□□□□□ -0.67
SEC61BP60468 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC10.87□□□□□ -0.67
SEC61BP60468 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SEC61BP60468 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SEC61BP60468 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC10.87□□□□□ -0.67
SEC61BP60468 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC10.87□□□□□ -0.67
SEC61BP60468 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
SEC61BP60468 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC10.87□□□□□ -0.67
SEC61BP60468 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC10.87□□□□□ -0.67
SEC61BP60468 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SEC61BP60468 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC10.86□□□□□ -0.67
SEC61BP60468 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC10.86□□□□□ -0.67
SEC61BP60468 MOK-233ENST00000524214 1539 ntTSL 2 BASIC10.86□□□□□ -0.67
SEC61BP60468 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SEC61BP60468 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 AL353807.1-201ENST00000427475 662 ntBASIC10.86□□□□□ -0.67
SEC61BP60468 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC10.86□□□□□ -0.67
SEC61BP60468 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 AC023632.3-201ENST00000521633 145 ntBASIC10.86□□□□□ -0.67
SEC61BP60468 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SEC61BP60468 RARRES2P10-201ENST00000564312 460 ntBASIC10.86□□□□□ -0.67
SEC61BP60468 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC10.86□□□□□ -0.67
SEC61BP60468 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SEC61BP60468 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC10.86□□□□□ -0.67
SEC61BP60468 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SEC61BP60468 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
SEC61BP60468 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC10.86□□□□□ -0.67
SEC61BP60468 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC10.86□□□□□ -0.67
SEC61BP60468 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SEC61BP60468 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC10.85□□□□□ -0.67
SEC61BP60468 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SEC61BP60468 TUB-203ENST00000534099 1759 ntTSL 2 BASIC10.85□□□□□ -0.67
SEC61BP60468 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SEC61BP60468 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SEC61BP60468 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SEC61BP60468 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SEC61BP60468 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SEC61BP60468 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
SEC61BP60468 AC011484.1-201ENST00000377652 1995 ntBASIC10.85□□□□□ -0.67
SEC61BP60468 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SEC61BP60468 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms