Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN20P56880 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN20P56880 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN20P56880 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN20P56880 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN20P56880 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN20P56880 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
CLDN20P56880 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDN20P56880 AC011484.1-201ENST00000377652 1995 ntBASIC18.49■□□□□ 0.55
CLDN20P56880 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN20P56880 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN20P56880 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN20P56880 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN20P56880 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN20P56880 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN20P56880 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN20P56880 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLDN20P56880 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN20P56880 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN20P56880 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLDN20P56880 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN20P56880 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN20P56880 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CLDN20P56880 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN20P56880 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN20P56880 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN20P56880 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN20P56880 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN20P56880 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.48■□□□□ 0.55
CLDN20P56880 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN20P56880 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN20P56880 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN20P56880 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN20P56880 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLDN20P56880 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN20P56880 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLDN20P56880 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN20P56880 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN20P56880 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 CYP21A1P-202ENST00000354927 1481 ntBASIC18.47■□□□□ 0.55
CLDN20P56880 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN20P56880 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN20P56880 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLDN20P56880 MCRIP2P1-201ENST00000394346 511 ntBASIC18.47■□□□□ 0.55
CLDN20P56880 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN20P56880 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.47■□□□□ 0.55
CLDN20P56880 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLDN20P56880 AC100791.3-201ENST00000617619 330 ntBASIC18.47■□□□□ 0.55
CLDN20P56880 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN20P56880 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN20P56880 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN20P56880 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN20P56880 AC121338.2-201ENST00000622535 1744 ntBASIC18.46■□□□□ 0.55
CLDN20P56880 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN20P56880 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN20P56880 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN20P56880 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN20P56880 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN20P56880 KRT17P1-201ENST00000399211 1546 ntBASIC18.46■□□□□ 0.55
CLDN20P56880 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN20P56880 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN20P56880 MIR4758-201ENST00000577688 71 ntBASIC18.46■□□□□ 0.55
CLDN20P56880 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN20P56880 CYP2T3P-201ENST00000601990 817 ntBASIC18.46■□□□□ 0.55
CLDN20P56880 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLDN20P56880 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLDN20P56880 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN20P56880 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN20P56880 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN20P56880 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN20P56880 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN20P56880 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN20P56880 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.54
CLDN20P56880 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN20P56880 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN20P56880 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN20P56880 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN20P56880 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms