Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN8P56748 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN8P56748 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN8P56748 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN8P56748 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN8P56748 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN8P56748 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN8P56748 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CLDN8P56748 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN8P56748 TERF1P5-201ENST00000477545 1207 ntBASIC19.22■□□□□ 0.67
CLDN8P56748 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN8P56748 AL356652.1-201ENST00000615962 565 ntBASIC19.22■□□□□ 0.67
CLDN8P56748 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLDN8P56748 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 AC087633.2-202ENST00000565166 1439 ntBASIC19.22■□□□□ 0.67
CLDN8P56748 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN8P56748 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN8P56748 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN8P56748 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN8P56748 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN8P56748 AL691432.2-201ENST00000607222 2038 ntBASIC19.22■□□□□ 0.67
CLDN8P56748 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN8P56748 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN8P56748 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN8P56748 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN8P56748 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN8P56748 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN8P56748 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN8P56748 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.21■□□□□ 0.67
CLDN8P56748 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN8P56748 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.21■□□□□ 0.67
CLDN8P56748 AL591742.1-201ENST00000604433 565 ntBASIC19.21■□□□□ 0.67
CLDN8P56748 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN8P56748 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN8P56748 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLDN8P56748 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN8P56748 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN8P56748 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN8P56748 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN8P56748 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CLDN8P56748 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN8P56748 AC010536.3-201ENST00000620306 533 ntBASIC19.2■□□□□ 0.66
CLDN8P56748 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN8P56748 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLDN8P56748 TMEM179-206ENST00000616017 1645 ntBASIC19.2■□□□□ 0.66
CLDN8P56748 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
CLDN8P56748 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN8P56748 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CLDN8P56748 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN8P56748 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CLDN8P56748 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN8P56748 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN8P56748 NTF6G-201ENST00000591094 616 ntBASIC19.19■□□□□ 0.66
CLDN8P56748 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms