Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK2P53671 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.37■□□□□ 0.85
LIMK2P53671 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK2P53671 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK2P53671 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK2P53671 AL138781.1-201ENST00000566567 1274 ntBASIC20.37■□□□□ 0.85
LIMK2P53671 AC105036.2-201ENST00000569468 176 ntBASIC20.37■□□□□ 0.85
LIMK2P53671 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.37■□□□□ 0.85
LIMK2P53671 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.37■□□□□ 0.85
LIMK2P53671 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.37■□□□□ 0.85
LIMK2P53671 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK2P53671 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK2P53671 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LIMK2P53671 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.36■□□□□ 0.85
LIMK2P53671 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.36■□□□□ 0.85
LIMK2P53671 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.36■□□□□ 0.85
LIMK2P53671 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
LIMK2P53671 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.36■□□□□ 0.85
LIMK2P53671 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK2P53671 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK2P53671 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK2P53671 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK2P53671 ABHD17AP1-201ENST00000358206 933 ntBASIC20.36■□□□□ 0.85
LIMK2P53671 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.36■□□□□ 0.85
LIMK2P53671 CD99P1-205ENST00000527459 561 ntBASIC20.36■□□□□ 0.85
LIMK2P53671 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK2P53671 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK2P53671 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.36■□□□□ 0.85
LIMK2P53671 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
LIMK2P53671 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.36■□□□□ 0.85
LIMK2P53671 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.35■□□□□ 0.85
LIMK2P53671 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.35■□□□□ 0.85
LIMK2P53671 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.35■□□□□ 0.85
LIMK2P53671 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.35■□□□□ 0.85
LIMK2P53671 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.35■□□□□ 0.85
LIMK2P53671 AC007322.4-201ENST00000509611 723 ntBASIC20.35■□□□□ 0.85
LIMK2P53671 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.35■□□□□ 0.85
LIMK2P53671 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.35■□□□□ 0.85
LIMK2P53671 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.35■□□□□ 0.85
LIMK2P53671 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.35■□□□□ 0.85
LIMK2P53671 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
LIMK2P53671 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
LIMK2P53671 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LIMK2P53671 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LIMK2P53671 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK2P53671 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LIMK2P53671 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.35■□□□□ 0.85
LIMK2P53671 AC068338.2-201ENST00000563278 1430 ntBASIC20.35■□□□□ 0.85
LIMK2P53671 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LIMK2P53671 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LIMK2P53671 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK2P53671 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK2P53671 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LIMK2P53671 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LIMK2P53671 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.34■□□□□ 0.85
LIMK2P53671 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.34■□□□□ 0.85
LIMK2P53671 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.34■□□□□ 0.85
LIMK2P53671 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LIMK2P53671 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.34■□□□□ 0.85
LIMK2P53671 AC243732.1-201ENST00000612648 864 ntBASIC20.34■□□□□ 0.85
LIMK2P53671 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LIMK2P53671 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK2P53671 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK2P53671 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK2P53671 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.34■□□□□ 0.85
LIMK2P53671 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LIMK2P53671 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK2P53671 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
LIMK2P53671 TCF3P1-201ENST00000423021 1937 ntBASIC20.33■□□□□ 0.85
LIMK2P53671 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK2P53671 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LIMK2P53671 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
LIMK2P53671 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK2P53671 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.33■□□□□ 0.85
LIMK2P53671 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK2P53671 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK2P53671 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK2P53671 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.33■□□□□ 0.85
LIMK2P53671 KRT18P6-201ENST00000555540 1265 ntBASIC20.33■□□□□ 0.85
LIMK2P53671 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LIMK2P53671 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LIMK2P53671 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LIMK2P53671 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms