Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6CP51160 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6CP51160 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6CP51160 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.81■■□□□ 1.08
PDE6CP51160 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6CP51160 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.81■■□□□ 1.08
PDE6CP51160 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PDE6CP51160 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6CP51160 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.81■■□□□ 1.08
PDE6CP51160 CD99P1-205ENST00000527459 561 ntBASIC21.81■■□□□ 1.08
PDE6CP51160 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6CP51160 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.81■■□□□ 1.08
PDE6CP51160 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6CP51160 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PDE6CP51160 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PDE6CP51160 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDE6CP51160 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE6CP51160 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE6CP51160 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDE6CP51160 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE6CP51160 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDE6CP51160 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.8■■□□□ 1.08
PDE6CP51160 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.8■■□□□ 1.08
PDE6CP51160 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
PDE6CP51160 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDE6CP51160 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDE6CP51160 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
PDE6CP51160 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6CP51160 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE6CP51160 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.79■■□□□ 1.08
PDE6CP51160 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6CP51160 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6CP51160 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.79■■□□□ 1.08
PDE6CP51160 KRT18P6-201ENST00000555540 1265 ntBASIC21.79■■□□□ 1.08
PDE6CP51160 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6CP51160 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PDE6CP51160 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6CP51160 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6CP51160 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6CP51160 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.79■■□□□ 1.08
PDE6CP51160 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6CP51160 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PDE6CP51160 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.78■■□□□ 1.08
PDE6CP51160 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
PDE6CP51160 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.78■■□□□ 1.08
PDE6CP51160 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.78■■□□□ 1.08
PDE6CP51160 MIPEPP3-201ENST00000412105 444 ntBASIC21.78■■□□□ 1.08
PDE6CP51160 RARRES2P4-201ENST00000514074 484 ntBASIC21.78■■□□□ 1.08
PDE6CP51160 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.78■■□□□ 1.08
PDE6CP51160 AC016405.3-201ENST00000607710 860 ntBASIC21.78■■□□□ 1.08
PDE6CP51160 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
PDE6CP51160 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
PDE6CP51160 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.78■■□□□ 1.08
PDE6CP51160 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6CP51160 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.78■■□□□ 1.08
PDE6CP51160 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6CP51160 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.77■■□□□ 1.08
PDE6CP51160 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.77■■□□□ 1.08
PDE6CP51160 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.77■■□□□ 1.08
PDE6CP51160 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6CP51160 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 AC092118.2-201ENST00000613495 667 ntBASIC21.77■■□□□ 1.08
PDE6CP51160 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.77■■□□□ 1.08
PDE6CP51160 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.77■■□□□ 1.08
PDE6CP51160 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
PDE6CP51160 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6CP51160 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
PDE6CP51160 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
PDE6CP51160 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6CP51160 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6CP51160 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PDE6CP51160 AL512408.1-201ENST00000569378 2000 ntBASIC21.77■■□□□ 1.07
PDE6CP51160 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms