Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.45■□□□□ 0.86
HADHAP40939 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.44■□□□□ 0.86
HADHAP40939 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.44■□□□□ 0.86
HADHAP40939 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
HADHAP40939 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
HADHAP40939 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.44■□□□□ 0.86
HADHAP40939 AC090192.1-201ENST00000517740 490 ntBASIC20.44■□□□□ 0.86
HADHAP40939 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.44■□□□□ 0.86
HADHAP40939 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.44■□□□□ 0.86
HADHAP40939 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
HADHAP40939 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 AC092720.2-201ENST00000602388 1665 ntBASIC20.44■□□□□ 0.86
HADHAP40939 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.44■□□□□ 0.86
HADHAP40939 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HADHAP40939 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HADHAP40939 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
HADHAP40939 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HADHAP40939 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HADHAP40939 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HADHAP40939 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HADHAP40939 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HADHAP40939 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HADHAP40939 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.43■□□□□ 0.86
HADHAP40939 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.43■□□□□ 0.86
HADHAP40939 AC100791.3-201ENST00000617619 330 ntBASIC20.43■□□□□ 0.86
HADHAP40939 AC073111.5-205ENST00000641717 521 ntBASIC20.43■□□□□ 0.86
HADHAP40939 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.43■□□□□ 0.86
HADHAP40939 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HADHAP40939 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HADHAP40939 AL512408.1-201ENST00000569378 2000 ntBASIC20.43■□□□□ 0.86
HADHAP40939 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.42■□□□□ 0.86
HADHAP40939 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HADHAP40939 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HADHAP40939 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HADHAP40939 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HADHAP40939 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HADHAP40939 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.42■□□□□ 0.86
HADHAP40939 CYP2T1P-201ENST00000432607 1285 ntBASIC20.42■□□□□ 0.86
HADHAP40939 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HADHAP40939 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.42■□□□□ 0.86
HADHAP40939 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.42■□□□□ 0.86
HADHAP40939 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.42■□□□□ 0.86
HADHAP40939 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.42■□□□□ 0.86
HADHAP40939 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.42■□□□□ 0.86
HADHAP40939 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HADHAP40939 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HADHAP40939 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
HADHAP40939 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HADHAP40939 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.42■□□□□ 0.86
HADHAP40939 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HADHAP40939 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HADHAP40939 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HADHAP40939 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
HADHAP40939 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HADHAP40939 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HADHAP40939 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
HADHAP40939 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HADHAP40939 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.41■□□□□ 0.86
HADHAP40939 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.41■□□□□ 0.86
HADHAP40939 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HADHAP40939 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.41■□□□□ 0.86
HADHAP40939 AC005181.1-201ENST00000604782 1256 ntBASIC20.41■□□□□ 0.86
HADHAP40939 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.41■□□□□ 0.86
HADHAP40939 OR10C1-204ENST00000622521 1039 ntBASIC20.41■□□□□ 0.86
HADHAP40939 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HADHAP40939 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HADHAP40939 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.41■□□□□ 0.86
HADHAP40939 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HADHAP40939 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.41■□□□□ 0.86
HADHAP40939 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HADHAP40939 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.41■□□□□ 0.86
HADHAP40939 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.41■□□□□ 0.86
HADHAP40939 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HADHAP40939 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HADHAP40939 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HADHAP40939 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HADHAP40939 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HADHAP40939 CYP21A1P-202ENST00000354927 1481 ntBASIC20.4■□□□□ 0.86
HADHAP40939 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HADHAP40939 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.4■□□□□ 0.86
HADHAP40939 CDCA4P2-201ENST00000441182 718 ntBASIC20.4■□□□□ 0.86
HADHAP40939 AC026185.1-201ENST00000445748 174 ntBASIC20.4■□□□□ 0.86
HADHAP40939 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HADHAP40939 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.4■□□□□ 0.86
HADHAP40939 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.4■□□□□ 0.86
HADHAP40939 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms