Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 YER079WYER079W 633 nt1.56□□□□□ -2.16
SHE3P38272 IES5YER092W 378 nt1.56□□□□□ -2.16
SHE3P38272 NAM7YMR080C 2916 nt1.56□□□□□ -2.16
SHE3P38272 YKL063CYKL063C 504 nt1.55□□□□□ -2.16
SHE3P38272 ERP4YOR016C 624 nt1.55□□□□□ -2.16
SHE3P38272 LEE1YPL054W 906 nt1.55□□□□□ -2.16
SHE3P38272 SNF5YBR289W 2718 nt1.55□□□□□ -2.16
SHE3P38272 MON2YNL297C 4911 nt1.55□□□□□ -2.16
SHE3P38272 GNT1YOR320C 1476 nt1.55□□□□□ -2.16
SHE3P38272 MDM20YOL076W 2391 nt1.55□□□□□ -2.16
SHE3P38272 SWF1YDR126W 1011 nt1.54□□□□□ -2.16
SHE3P38272 YDR269CYDR269C 324 nt1.54□□□□□ -2.16
SHE3P38272 SDH7YDR511W 402 nt1.54□□□□□ -2.16
SHE3P38272 YER076W-AYER076W-A 348 nt1.54□□□□□ -2.16
SHE3P38272 YER087C-AYER087C-A 552 nt1.54□□□□□ -2.16
SHE3P38272 YFL019CYFL019C 354 nt1.54□□□□□ -2.16
SHE3P38272 RPL42BYHR141C 321 nt1.54□□□□□ -2.16
SHE3P38272 YBL071CYBL071C 309 nt1.54□□□□□ -2.16
SHE3P38272 RPL42AYNL162W 321 nt1.54□□□□□ -2.16
SHE3P38272 YPR099CYPR099C 357 nt1.54□□□□□ -2.16
SHE3P38272 SLM1YIL105C 2061 nt1.54□□□□□ -2.16
SHE3P38272 BTT1YDR252W 450 nt1.53□□□□□ -2.16
SHE3P38272 YOL159CYOL159C 516 nt1.53□□□□□ -2.16
SHE3P38272 YOR293C-AYOR293C-A 150 nt1.53□□□□□ -2.16
SHE3P38272 IRA1YBR140C 9279 nt1.53□□□□□ -2.16
SHE3P38272 HIR3YJR140C 4947 nt1.53□□□□□ -2.16
SHE3P38272 PAN3YKL025C 2040 nt1.52□□□□□ -2.17
SHE3P38272 SMY1YKL079W 1971 nt1.52□□□□□ -2.17
SHE3P38272 SEF1YBL066C 3447 nt1.52□□□□□ -2.17
SHE3P38272 YBR184WYBR184W 1572 nt1.52□□□□□ -2.17
SHE3P38272 YCR087C-AYCR087C-A 462 nt1.52□□□□□ -2.17
SHE3P38272 MCM22YJR135C 720 nt1.52□□□□□ -2.17
SHE3P38272 CYB5YNL111C 363 nt1.52□□□□□ -2.17
SHE3P38272 DIE2YGR227W 1578 nt1.51□□□□□ -2.17
SHE3P38272 YCR043CYCR043C 384 nt1.51□□□□□ -2.17
SHE3P38272 YDL152WYDL152W 366 nt1.51□□□□□ -2.17
SHE3P38272 WIP1YDR374W-A 270 nt1.51□□□□□ -2.17
SHE3P38272 RTT102YGR275W 474 nt1.51□□□□□ -2.17
SHE3P38272 YLR154W-FYLR154W-F 141 nt1.51□□□□□ -2.17
SHE3P38272 YLR434CYLR434C 384 nt1.51□□□□□ -2.17
SHE3P38272 YBP1YBR216C 2025 nt1.5□□□□□ -2.17
SHE3P38272 RPS24BYIL069C 408 nt1.5□□□□□ -2.17
SHE3P38272 PHS1YJL097W 654 nt1.5□□□□□ -2.17
SHE3P38272 YML009C-AYML009C-A 327 nt1.5□□□□□ -2.17
SHE3P38272 HCH1YNL281W 462 nt1.5□□□□□ -2.17
SHE3P38272 YBR285WYBR285W 435 nt1.5□□□□□ -2.17
SHE3P38272 TFC8YPL007C 1767 nt1.49□□□□□ -2.17
SHE3P38272 RPH1YER169W 2391 nt1.49□□□□□ -2.17
SHE3P38272 CGI121YML036W 546 nt1.49□□□□□ -2.17
SHE3P38272 RPL32YBL092W 393 nt1.49□□□□□ -2.17
SHE3P38272 MRPL50YNR022C 420 nt1.49□□□□□ -2.17
SHE3P38272 YPL238CYPL238C 390 nt1.49□□□□□ -2.17
SHE3P38272 YCL046WYCL046W 324 nt1.49□□□□□ -2.17
SHE3P38272 CCH1YGR217W 6120 nt1.49□□□□□ -2.17
SHE3P38272 YHL009W-AYHL009W-A 1242 nt1.48□□□□□ -2.17
SHE3P38272 YHR138CYHR138C 345 nt1.48□□□□□ -2.17
SHE3P38272 PGA1YNL158W 597 nt1.48□□□□□ -2.17
SHE3P38272 RKM1YPL208W 1752 nt1.48□□□□□ -2.17
SHE3P38272 DAS1YJL149W 1992 nt1.48□□□□□ -2.17
SHE3P38272 YGR109W-BYGR109W-B 4644 nt1.47□□□□□ -2.17
SHE3P38272 YJR039WYJR039W 3366 nt1.47□□□□□ -2.17
SHE3P38272 SPO23YBR250W 1572 nt1.47□□□□□ -2.17
SHE3P38272 YDR157WYDR157W 402 nt1.47□□□□□ -2.17
SHE3P38272 YGL239CYGL239C 315 nt1.47□□□□□ -2.17
SHE3P38272 YIL066W-AYIL066W-A 444 nt1.47□□□□□ -2.17
SHE3P38272 YMR001C-AYMR001C-A 231 nt1.47□□□□□ -2.17
SHE3P38272 NUP120YKL057C 3114 nt1.46□□□□□ -2.17
SHE3P38272 YGR130CYGR130C 2451 nt1.46□□□□□ -2.18
SHE3P38272 TDA9YML081W 3756 nt1.46□□□□□ -2.18
SHE3P38272 PAU18YLL064C 363 nt1.46□□□□□ -2.18
SHE3P38272 YMR230W-AYMR230W-A 189 nt1.46□□□□□ -2.18
SHE3P38272 PAU6YNR076W 363 nt1.46□□□□□ -2.18
SHE3P38272 YOR019WYOR019W 2193 nt1.45□□□□□ -2.18
SHE3P38272 TOF2YKR010C 2316 nt1.45□□□□□ -2.18
SHE3P38272 OSH6YKR003W 1347 nt1.45□□□□□ -2.18
SHE3P38272 YDR118W-AYDR118W-A 117 nt1.45□□□□□ -2.18
SHE3P38272 YHR028W-AYHR028W-A 321 nt1.45□□□□□ -2.18
SHE3P38272 YKL183C-AYKL183C-A 213 nt1.45□□□□□ -2.18
SHE3P38272 RPL26AYLR344W 384 nt1.45□□□□□ -2.18
SHE3P38272 YNL114CYNL114C 372 nt1.45□□□□□ -2.18
SHE3P38272 SPC98YNL126W 2541 nt1.45□□□□□ -2.18
SHE3P38272 ZRG8YER033C 3231 nt1.44□□□□□ -2.18
SHE3P38272 RPL31AYDL075W 342 nt1.44□□□□□ -2.18
SHE3P38272 tH(GUG)E1tH(GUG)E1 72 nt1.44□□□□□ -2.18
SHE3P38272 tH(GUG)E2tH(GUG)E2 72 nt1.44□□□□□ -2.18
SHE3P38272 tH(GUG)G1tH(GUG)G1 72 nt1.44□□□□□ -2.18
SHE3P38272 tH(GUG)G2tH(GUG)G2 72 nt1.44□□□□□ -2.18
SHE3P38272 tH(GUG)HtH(GUG)H 72 nt1.44□□□□□ -2.18
SHE3P38272 tH(GUG)KtH(GUG)K 72 nt1.44□□□□□ -2.18
SHE3P38272 tH(GUG)MtH(GUG)M 72 nt1.44□□□□□ -2.18
SHE3P38272 YOR053WYOR053W 342 nt1.44□□□□□ -2.18
SHE3P38272 YPL185WYPL185W 396 nt1.44□□□□□ -2.18
SHE3P38272 MSC6YOR354C 2079 nt1.44□□□□□ -2.18
SHE3P38272 MMS22YLR320W 4365 nt1.43□□□□□ -2.18
SHE3P38272 GRR1YJR090C 3456 nt1.43□□□□□ -2.18
SHE3P38272 YCR102W-AYCR102W-A 198 nt1.43□□□□□ -2.18
SHE3P38272 PAU3YCR104W 375 nt1.43□□□□□ -2.18
SHE3P38272 YER137W-AYER137W-A 306 nt1.43□□□□□ -2.18
SHE3P38272 YAR047CYAR047C 321 nt1.43□□□□□ -2.18
SHE3P38272 TBS1YBR150C 3285 nt1.43□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 94.1 ms