Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 YDR509WYDR509W 348 nt-0.32□□□□□ -2.46
UFD4P33202 RAD10YML095C 633 nt-0.32□□□□□ -2.46
UFD4P33202 VPS52YDR484W 1926 nt-0.33□□□□□ -2.46
UFD4P33202 TEX1YNL253W 1269 nt-0.33□□□□□ -2.46
UFD4P33202 YJL049WYJL049W 1353 nt-0.34□□□□□ -2.46
UFD4P33202 YAL064WYAL064W 285 nt-0.34□□□□□ -2.46
UFD4P33202 YNL089CYNL089C 477 nt-0.34□□□□□ -2.46
UFD4P33202 PEX15YOL044W 1152 nt-0.34□□□□□ -2.46
UFD4P33202 YBR224WYBR224W 516 nt-0.34□□□□□ -2.46
UFD4P33202 NOP9YJL010C 2001 nt-0.34□□□□□ -2.46
UFD4P33202 YKL136WYKL136W 399 nt-0.35□□□□□ -2.46
UFD4P33202 GRX8YLR364W 330 nt-0.35□□□□□ -2.46
UFD4P33202 TRS20YBR254C 528 nt-0.35□□□□□ -2.46
UFD4P33202 CHS6YJL099W 2241 nt-0.35□□□□□ -2.46
UFD4P33202 YPD1YDL235C 504 nt-0.36□□□□□ -2.47
UFD4P33202 SSS1YDR086C 243 nt-0.36□□□□□ -2.47
UFD4P33202 ISD11YER048W-A 285 nt-0.36□□□□□ -2.47
UFD4P33202 RPL26BYGR034W 384 nt-0.36□□□□□ -2.47
UFD4P33202 YNL050CYNL050C 813 nt-0.36□□□□□ -2.47
UFD4P33202 OCA6YDR067C 675 nt-0.37□□□□□ -2.47
UFD4P33202 CGI121YML036W 546 nt-0.37□□□□□ -2.47
UFD4P33202 YMR173W-AYMR173W-A 1185 nt-0.37□□□□□ -2.47
UFD4P33202 DDR48YMR173W 1293 nt-0.37□□□□□ -2.47
UFD4P33202 YOR105WYOR105W 327 nt-0.37□□□□□ -2.47
UFD4P33202 AIM44YPL158C 2277 nt-0.38□□□□□ -2.47
UFD4P33202 MET32YDR253C 576 nt-0.38□□□□□ -2.47
UFD4P33202 EMC4YGL231C 573 nt-0.38□□□□□ -2.47
UFD4P33202 MVB12YGR206W 306 nt-0.38□□□□□ -2.47
UFD4P33202 AIM41YOR215C 558 nt-0.38□□□□□ -2.47
UFD4P33202 snR63snR63 255 nt-0.39□□□□□ -2.47
UFD4P33202 YDR210WYDR210W 228 nt-0.39□□□□□ -2.47
UFD4P33202 YOL024WYOL024W 519 nt-0.39□□□□□ -2.47
UFD4P33202 STO1YMR125W 2586 nt-0.39□□□□□ -2.47
UFD4P33202 AME1YBR211C 975 nt-0.4□□□□□ -2.47
UFD4P33202 SPO77YLR341W 1434 nt-0.4□□□□□ -2.47
UFD4P33202 YDR199WYDR199W 366 nt-0.41□□□□□ -2.47
UFD4P33202 YGR265WYGR265W 411 nt-0.41□□□□□ -2.47
UFD4P33202 RPL26AYLR344W 384 nt-0.41□□□□□ -2.47
UFD4P33202 YLR458WYLR458W 381 nt-0.41□□□□□ -2.48
UFD4P33202 YPR170W-AYPR170W-A 186 nt-0.41□□□□□ -2.48
UFD4P33202 PDE2YOR360C 1581 nt-0.42□□□□□ -2.48
UFD4P33202 YNR077CYNR077C 255 nt-0.42□□□□□ -2.48
UFD4P33202 BFR2YDR299W 1605 nt-0.43□□□□□ -2.48
UFD4P33202 YBL068W-AYBL068W-A 237 nt-0.43□□□□□ -2.48
UFD4P33202 NPR2YEL062W 1848 nt-0.44□□□□□ -2.48
UFD4P33202 YJL127C-BYJL127C-B 159 nt-0.44□□□□□ -2.48
UFD4P33202 RPS27AYKL156W 249 nt-0.45□□□□□ -2.48
UFD4P33202 YKL183C-AYKL183C-A 213 nt-0.45□□□□□ -2.48
UFD4P33202 PET111YMR257C 2403 nt-0.45□□□□□ -2.48
UFD4P33202 NOC3YLR002C 1992 nt-0.45□□□□□ -2.48
UFD4P33202 NOT5YPR072W 1683 nt-0.46□□□□□ -2.48
UFD4P33202 YCR090CYCR090C 549 nt-0.47□□□□□ -2.48
UFD4P33202 RPB10YOR210W 213 nt-0.47□□□□□ -2.48
UFD4P33202 YOR282WYOR282W 321 nt-0.47□□□□□ -2.48
UFD4P33202 PRP42YDR235W 1635 nt-0.47□□□□□ -2.49
UFD4P33202 GPX2YBR244W 489 nt-0.48□□□□□ -2.49
UFD4P33202 SST2YLR452C 2097 nt-0.48□□□□□ -2.49
UFD4P33202 SLD3YGL113W 2007 nt-0.48□□□□□ -2.49
UFD4P33202 YBR062CYBR062C 543 nt-0.48□□□□□ -2.49
UFD4P33202 COX6YHR051W 447 nt-0.49□□□□□ -2.49
UFD4P33202 YPL225WYPL225W 441 nt-0.5□□□□□ -2.49
UFD4P33202 YDR034C-CYDR034C-C 1317 nt-0.51□□□□□ -2.49
UFD4P33202 YFL002W-BYFL002W-B 1317 nt-0.51□□□□□ -2.49
UFD4P33202 YGR161W-AYGR161W-A 1317 nt-0.51□□□□□ -2.49
UFD4P33202 YLR410W-AYLR410W-A 1317 nt-0.51□□□□□ -2.49
UFD4P33202 YBL100W-AYBL100W-A 1317 nt-0.51□□□□□ -2.49
UFD4P33202 YCL020WYCL020W 1317 nt-0.51□□□□□ -2.49
UFD4P33202 BIG1YHR101C 1008 nt-0.51□□□□□ -2.49
UFD4P33202 YEL010WYEL010W 351 nt-0.52□□□□□ -2.49
UFD4P33202 YPL197CYPL197C 414 nt-0.52□□□□□ -2.49
UFD4P33202 snR84snR84 550 nt-0.53□□□□□ -2.49
UFD4P33202 VMA21YGR105W 234 nt-0.53□□□□□ -2.49
UFD4P33202 YAL069WYAL069W 315 nt-0.53□□□□□ -2.49
UFD4P33202 YBR071WYBR071W 636 nt-0.54□□□□□ -2.5
UFD4P33202 SEC10YLR166C 2616 nt-0.54□□□□□ -2.5
UFD4P33202 NPC2YDL046W 522 nt-0.54□□□□□ -2.5
UFD4P33202 YDL187CYDL187C 330 nt-0.54□□□□□ -2.5
UFD4P33202 NEJ1YLR265C 1029 nt-0.54□□□□□ -2.5
UFD4P33202 PMP1YCR024C-A 123 nt-0.55□□□□□ -2.5
UFD4P33202 YNR021WYNR021W 1215 nt-0.55□□□□□ -2.5
UFD4P33202 MYO1YHR023W 5787 nt-0.55□□□□□ -2.5
UFD4P33202 RAD61YDR014W 1944 nt-0.56□□□□□ -2.5
UFD4P33202 YDR262WYDR262W 819 nt-0.56□□□□□ -2.5
UFD4P33202 SLD5YDR489W 885 nt-0.56□□□□□ -2.5
UFD4P33202 RUF22RUF22 515 nt-0.56□□□□□ -2.5
UFD4P33202 SPR2YOR214C 711 nt-0.56□□□□□ -2.5
UFD4P33202 SPO12YHR152W 522 nt-0.57□□□□□ -2.5
UFD4P33202 YJL127W-AYJL127W-A 117 nt-0.57□□□□□ -2.5
UFD4P33202 SWM2YNR004W 441 nt-0.57□□□□□ -2.5
UFD4P33202 NTF2YER009W 378 nt-0.59□□□□□ -2.5
UFD4P33202 CHZ1YER030W 462 nt-0.59□□□□□ -2.5
UFD4P33202 RAD6YGL058W 519 nt-0.6□□□□□ -2.5
UFD4P33202 AI4Q0065 1671 nt-0.61□□□□□ -2.51
UFD4P33202 MMS4YBR098W 2076 nt-0.61□□□□□ -2.51
UFD4P33202 RCO1YMR075W 2055 nt-0.61□□□□□ -2.51
UFD4P33202 YOR169CYOR169C 465 nt-0.61□□□□□ -2.51
UFD4P33202 BNS1YGR230W 414 nt-0.62□□□□□ -2.51
UFD4P33202 YPL080CYPL080C 327 nt-0.62□□□□□ -2.51
UFD4P33202 YBR206WYBR206W 324 nt-0.62□□□□□ -2.51
UFD4P33202 YHL012WYHL012W 1482 nt-0.63□□□□□ -2.51
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms