Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 OR10C1-204ENST00000622521 1039 ntBASIC18.55■□□□□ 0.56
RPS4Y1P22090 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4Y1P22090 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RPS4Y1P22090 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.54■□□□□ 0.56
RPS4Y1P22090 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4Y1P22090 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4Y1P22090 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RPS4Y1P22090 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RPS4Y1P22090 KRT18P68-201ENST00000392293 1000 ntBASIC18.54■□□□□ 0.56
RPS4Y1P22090 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4Y1P22090 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4Y1P22090 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.54■□□□□ 0.56
RPS4Y1P22090 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4Y1P22090 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RPS4Y1P22090 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4Y1P22090 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RPS4Y1P22090 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4Y1P22090 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RPS4Y1P22090 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4Y1P22090 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4Y1P22090 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.54■□□□□ 0.56
RPS4Y1P22090 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.54■□□□□ 0.56
RPS4Y1P22090 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.53■□□□□ 0.56
RPS4Y1P22090 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4Y1P22090 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RPS4Y1P22090 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RPS4Y1P22090 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 AC010980.2-201ENST00000587099 1412 ntBASIC18.52■□□□□ 0.56
RPS4Y1P22090 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 AC004911.1-201ENST00000416316 871 ntBASIC18.52■□□□□ 0.56
RPS4Y1P22090 AC008694.1-202ENST00000636953 945 ntBASIC18.52■□□□□ 0.56
RPS4Y1P22090 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4Y1P22090 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.52■□□□□ 0.56
RPS4Y1P22090 AFG3L1P-217ENST00000557444 2447 ntBASIC18.52■□□□□ 0.55
RPS4Y1P22090 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPS4Y1P22090 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPS4Y1P22090 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 AL512625.2-201ENST00000417533 625 ntBASIC18.51■□□□□ 0.55
RPS4Y1P22090 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms