Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFRAP16234 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFRAP16234 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFRAP16234 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.23■□□□□ 0.99
PDGFRAP16234 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.23■□□□□ 0.99
PDGFRAP16234 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFRAP16234 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.23■□□□□ 0.99
PDGFRAP16234 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFRAP16234 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFRAP16234 AL138781.1-201ENST00000566567 1274 ntBASIC21.23■□□□□ 0.99
PDGFRAP16234 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFRAP16234 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFRAP16234 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFRAP16234 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFRAP16234 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFRAP16234 MKRN4P-201ENST00000444706 1521 ntBASIC21.23■□□□□ 0.99
PDGFRAP16234 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFRAP16234 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PDGFRAP16234 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.22■□□□□ 0.99
PDGFRAP16234 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.22■□□□□ 0.99
PDGFRAP16234 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.22■□□□□ 0.99
PDGFRAP16234 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.22■□□□□ 0.99
PDGFRAP16234 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFRAP16234 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PDGFRAP16234 AL162377.1-201ENST00000618844 1793 ntBASIC21.21■□□□□ 0.99
PDGFRAP16234 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.21■□□□□ 0.99
PDGFRAP16234 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.21■□□□□ 0.99
PDGFRAP16234 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.21■□□□□ 0.99
PDGFRAP16234 AC105020.6-201ENST00000621523 1217 ntBASIC21.21■□□□□ 0.99
PDGFRAP16234 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.21■□□□□ 0.99
PDGFRAP16234 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PDGFRAP16234 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 SMG8-203ENST00000578922 2178 ntBASIC21.21■□□□□ 0.99
PDGFRAP16234 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
PDGFRAP16234 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PDGFRAP16234 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFRAP16234 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PDGFRAP16234 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.2■□□□□ 0.98
PDGFRAP16234 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
PDGFRAP16234 AC073130.3-201ENST00000624389 2278 ntBASIC21.2■□□□□ 0.98
PDGFRAP16234 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.2■□□□□ 0.98
PDGFRAP16234 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.2■□□□□ 0.98
PDGFRAP16234 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.2■□□□□ 0.98
PDGFRAP16234 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.2■□□□□ 0.98
PDGFRAP16234 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.2■□□□□ 0.98
PDGFRAP16234 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.2■□□□□ 0.98
PDGFRAP16234 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
PDGFRAP16234 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
PDGFRAP16234 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFRAP16234 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDGFRAP16234 DPP3P2-201ENST00000416030 1696 ntBASIC21.19■□□□□ 0.98
PDGFRAP16234 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.19■□□□□ 0.98
PDGFRAP16234 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDGFRAP16234 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDGFRAP16234 AC142086.2-201ENST00000569753 217 ntBASIC21.19■□□□□ 0.98
PDGFRAP16234 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.19■□□□□ 0.98
PDGFRAP16234 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.19■□□□□ 0.98
PDGFRAP16234 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms