Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.3■■□□□ 1
RTN3O95197 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.3■■□□□ 1
RTN3O95197 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
RTN3O95197 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RTN3O95197 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RTN3O95197 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.3■■□□□ 1
RTN3O95197 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
RTN3O95197 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.3■■□□□ 1
RTN3O95197 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.3■■□□□ 1
RTN3O95197 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.3■■□□□ 1
RTN3O95197 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.3■■□□□ 1
RTN3O95197 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN3O95197 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.29■■□□□ 1
RTN3O95197 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.29■■□□□ 1
RTN3O95197 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.29■■□□□ 1
RTN3O95197 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.29■■□□□ 1
RTN3O95197 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 PKD1P6-201ENST00000343738 4769 ntBASIC21.29■■□□□ 1
RTN3O95197 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.29■■□□□ 1
RTN3O95197 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 UNC93B4-201ENST00000505679 747 ntBASIC21.29■■□□□ 1
RTN3O95197 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
RTN3O95197 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.29■■□□□ 1
RTN3O95197 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.29■■□□□ 1
RTN3O95197 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTN3O95197 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RTN3O95197 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.28■■□□□ 1
RTN3O95197 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.28■■□□□ 1
RTN3O95197 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RTN3O95197 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.28■■□□□ 1
RTN3O95197 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.28■■□□□ 1
RTN3O95197 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.28■■□□□ 1
RTN3O95197 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RTN3O95197 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.28■■□□□ 1
RTN3O95197 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.28■■□□□ 1
RTN3O95197 AC006058.3-201ENST00000606217 1069 ntBASIC21.28■■□□□ 1
RTN3O95197 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTN3O95197 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTN3O95197 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTN3O95197 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTN3O95197 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTN3O95197 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RTN3O95197 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RTN3O95197 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.27■■□□□ 1
RTN3O95197 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTN3O95197 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.27■■□□□ 1
RTN3O95197 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTN3O95197 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RTN3O95197 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTN3O95197 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RTN3O95197 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTN3O95197 SOX15-203ENST00000570788 1093 ntBASIC21.27■■□□□ 1
RTN3O95197 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RTN3O95197 AC008403.3-201ENST00000598924 454 ntBASIC21.27■■□□□ 1
RTN3O95197 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.27■■□□□ 1
RTN3O95197 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RTN3O95197 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.27■■□□□ 1
RTN3O95197 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RTN3O95197 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.27■■□□□ 1
RTN3O95197 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RTN3O95197 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RTN3O95197 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RTN3O95197 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.26■□□□□ 0.99
RTN3O95197 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RTN3O95197 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.26■□□□□ 0.99
RTN3O95197 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 AC006128.1-201ENST00000624704 1661 ntBASIC21.26■□□□□ 0.99
RTN3O95197 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RTN3O95197 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RTN3O95197 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.26■□□□□ 0.99
RTN3O95197 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RTN3O95197 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.26■□□□□ 0.99
RTN3O95197 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN3O95197 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms