Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC26.09■■□□□ 1.77
PTCD1O75127 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.08■■□□□ 1.77
PTCD1O75127 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PTCD1O75127 AC027702.1-201ENST00000563810 1770 ntBASIC26.08■■□□□ 1.77
PTCD1O75127 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.08■■□□□ 1.77
PTCD1O75127 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.08■■□□□ 1.77
PTCD1O75127 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
PTCD1O75127 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
PTCD1O75127 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
PTCD1O75127 AC026471.5-201ENST00000615068 467 ntBASIC26.08■■□□□ 1.77
PTCD1O75127 AL121829.2-201ENST00000620908 328 ntBASIC26.08■■□□□ 1.77
PTCD1O75127 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.08■■□□□ 1.77
PTCD1O75127 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PTCD1O75127 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCD1O75127 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCD1O75127 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCD1O75127 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
PTCD1O75127 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.07■■□□□ 1.76
PTCD1O75127 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCD1O75127 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCD1O75127 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.07■■□□□ 1.76
PTCD1O75127 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.07■■□□□ 1.76
PTCD1O75127 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PTCD1O75127 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PTCD1O75127 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.07■■□□□ 1.76
PTCD1O75127 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCD1O75127 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
PTCD1O75127 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 AP003071.4-201ENST00000562276 1284 ntBASIC26.06■■□□□ 1.76
PTCD1O75127 GRAP-204ENST00000573099 846 ntTSL 3 BASIC26.06■■□□□ 1.76
PTCD1O75127 AF186192.3-201ENST00000583427 947 ntBASIC26.06■■□□□ 1.76
PTCD1O75127 AC012306.2-201ENST00000609350 630 ntBASIC26.06■■□□□ 1.76
PTCD1O75127 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC26.06■■□□□ 1.76
PTCD1O75127 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 HTR7P1-201ENST00000538670 1336 ntBASIC26.06■■□□□ 1.76
PTCD1O75127 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD1O75127 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC26.05■■□□□ 1.76
PTCD1O75127 KRT8P36-201ENST00000489121 1440 ntBASIC26.05■■□□□ 1.76
PTCD1O75127 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD1O75127 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD1O75127 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD1O75127 AC244015.2-201ENST00000616358 1861 ntBASIC26.05■■□□□ 1.76
PTCD1O75127 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD1O75127 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.05■■□□□ 1.76
PTCD1O75127 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.05■■□□□ 1.76
PTCD1O75127 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD1O75127 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD1O75127 AC023632.3-201ENST00000521633 145 ntBASIC26.05■■□□□ 1.76
PTCD1O75127 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.05■■□□□ 1.76
PTCD1O75127 AL353708.3-201ENST00000610272 989 ntBASIC26.05■■□□□ 1.76
PTCD1O75127 AC097493.4-201ENST00000641197 219 ntBASIC26.05■■□□□ 1.76
PTCD1O75127 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
PTCD1O75127 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD1O75127 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD1O75127 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC26.05■■□□□ 1.76
PTCD1O75127 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.05■■□□□ 1.76
PTCD1O75127 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.05■■□□□ 1.76
PTCD1O75127 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.05■■□□□ 1.76
PTCD1O75127 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC26.04■■□□□ 1.76
PTCD1O75127 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD1O75127 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD1O75127 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD1O75127 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD1O75127 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD1O75127 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.04■■□□□ 1.76
PTCD1O75127 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.04■■□□□ 1.76
PTCD1O75127 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.04■■□□□ 1.76
PTCD1O75127 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC26.04■■□□□ 1.76
PTCD1O75127 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC26.04■■□□□ 1.76
PTCD1O75127 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD1O75127 FBXW4P1-201ENST00000426721 2239 ntBASIC26.04■■□□□ 1.76
PTCD1O75127 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.04■■□□□ 1.76
PTCD1O75127 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD1O75127 NBPF21P-201ENST00000425093 1451 ntBASIC26.04■■□□□ 1.76
PTCD1O75127 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD1O75127 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PTCD1O75127 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PTCD1O75127 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
PTCD1O75127 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PTCD1O75127 RCN1P1-201ENST00000400413 996 ntBASIC26.03■■□□□ 1.76
PTCD1O75127 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
PTCD1O75127 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
PTCD1O75127 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC26.03■■□□□ 1.76
PTCD1O75127 RPS15-203ENST00000586096 570 ntTSL 2 BASIC26.03■■□□□ 1.76
PTCD1O75127 CD177P1-201ENST00000606252 935 ntBASIC26.03■■□□□ 1.76
PTCD1O75127 MIR2861-201ENST00000636310 90 ntBASIC26.03■■□□□ 1.76
PTCD1O75127 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PTCD1O75127 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PTCD1O75127 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms