Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
PLOD3O60568 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PLOD3O60568 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PLOD3O60568 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PLOD3O60568 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PLOD3O60568 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PLOD3O60568 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PLOD3O60568 LINC01006-201ENST00000333319 2292 ntBASIC19.02■□□□□ 0.64
PLOD3O60568 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PLOD3O60568 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PLOD3O60568 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PLOD3O60568 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PLOD3O60568 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PLOD3O60568 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.02■□□□□ 0.64
PLOD3O60568 AC005181.1-201ENST00000604782 1256 ntBASIC19.02■□□□□ 0.64
PLOD3O60568 RAP2CP1-201ENST00000605103 478 ntBASIC19.02■□□□□ 0.64
PLOD3O60568 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.02■□□□□ 0.64
PLOD3O60568 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PLOD3O60568 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PLOD3O60568 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.02■□□□□ 0.63
PLOD3O60568 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.02■□□□□ 0.63
PLOD3O60568 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PLOD3O60568 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
PLOD3O60568 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.02■□□□□ 0.63
PLOD3O60568 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.01■□□□□ 0.63
PLOD3O60568 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.01■□□□□ 0.63
PLOD3O60568 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PLOD3O60568 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PLOD3O60568 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PLOD3O60568 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PLOD3O60568 MCRIP2P1-201ENST00000394346 511 ntBASIC19.01■□□□□ 0.63
PLOD3O60568 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.01■□□□□ 0.63
PLOD3O60568 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.01■□□□□ 0.63
PLOD3O60568 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PLOD3O60568 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PLOD3O60568 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PLOD3O60568 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PLOD3O60568 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.01■□□□□ 0.63
PLOD3O60568 AC092720.2-201ENST00000602388 1665 ntBASIC19.01■□□□□ 0.63
PLOD3O60568 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PLOD3O60568 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 AC138932.1-201ENST00000534164 6830 ntBASIC19■□□□□ 0.63
PLOD3O60568 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
PLOD3O60568 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19■□□□□ 0.63
PLOD3O60568 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 AL512625.2-201ENST00000417533 625 ntBASIC19■□□□□ 0.63
PLOD3O60568 AC026185.1-201ENST00000445748 174 ntBASIC19■□□□□ 0.63
PLOD3O60568 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 AL356652.1-201ENST00000615962 565 ntBASIC19■□□□□ 0.63
PLOD3O60568 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19■□□□□ 0.63
PLOD3O60568 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PLOD3O60568 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19■□□□□ 0.63
PLOD3O60568 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19■□□□□ 0.63
PLOD3O60568 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PLOD3O60568 AL391422.3-201ENST00000603791 2761 ntBASIC18.99■□□□□ 0.63
PLOD3O60568 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PLOD3O60568 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.99■□□□□ 0.63
PLOD3O60568 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PLOD3O60568 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PLOD3O60568 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PLOD3O60568 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PLOD3O60568 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PLOD3O60568 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PLOD3O60568 AC133552.2-202ENST00000575694 574 ntBASIC18.99■□□□□ 0.63
PLOD3O60568 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.99■□□□□ 0.63
PLOD3O60568 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PLOD3O60568 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PLOD3O60568 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PLOD3O60568 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PLOD3O60568 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.99■□□□□ 0.63
PLOD3O60568 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.99■□□□□ 0.63
PLOD3O60568 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PLOD3O60568 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PLOD3O60568 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.99■□□□□ 0.63
PLOD3O60568 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PLOD3O60568 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.98■□□□□ 0.63
PLOD3O60568 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PLOD3O60568 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PLOD3O60568 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PLOD3O60568 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.98■□□□□ 0.63
PLOD3O60568 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PLOD3O60568 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PLOD3O60568 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PLOD3O60568 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PLOD3O60568 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PLOD3O60568 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms