Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SLC28A1O00337 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC28A1O00337 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A1O00337 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A1O00337 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC28A1O00337 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A1O00337 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC28A1O00337 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A1O00337 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A1O00337 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC28A1O00337 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC28A1O00337 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC28A1O00337 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 TERF1P5-201ENST00000477545 1207 ntBASIC19.45■□□□□ 0.7
SLC28A1O00337 AL591742.1-201ENST00000604433 565 ntBASIC19.45■□□□□ 0.7
SLC28A1O00337 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC28A1O00337 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A1O00337 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC28A1O00337 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SLC28A1O00337 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC28A1O00337 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC28A1O00337 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.44■□□□□ 0.7
SLC28A1O00337 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SLC28A1O00337 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A1O00337 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC28A1O00337 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC28A1O00337 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A1O00337 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC28A1O00337 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A1O00337 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC28A1O00337 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC28A1O00337 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC28A1O00337 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC28A1O00337 NTF6G-201ENST00000591094 616 ntBASIC19.43■□□□□ 0.7
SLC28A1O00337 AL356652.1-201ENST00000615962 565 ntBASIC19.43■□□□□ 0.7
SLC28A1O00337 AC010536.3-201ENST00000620306 533 ntBASIC19.43■□□□□ 0.7
SLC28A1O00337 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SLC28A1O00337 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A1O00337 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A1O00337 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A1O00337 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A1O00337 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A1O00337 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A1O00337 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SLC28A1O00337 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC28A1O00337 AC087633.2-202ENST00000565166 1439 ntBASIC19.42■□□□□ 0.7
SLC28A1O00337 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
SLC28A1O00337 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC28A1O00337 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC28A1O00337 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC28A1O00337 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC28A1O00337 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.42■□□□□ 0.7
SLC28A1O00337 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC28A1O00337 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A1O00337 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A1O00337 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC28A1O00337 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC28A1O00337 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A1O00337 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A1O00337 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC28A1O00337 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC28A1O00337 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A1O00337 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC28A1O00337 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC28A1O00337 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A1O00337 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A1O00337 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms