Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 PKD1P6-201ENST00000343738 4769 ntBASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 PNMA6B-201ENST00000538162 1200 ntBASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 AP005212.1-201ENST00000581547 1997 ntBASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 AL157384.1-201ENST00000445995 2473 ntBASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YJEFN3A6XGL0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 AC020907.5-201ENST00000624372 1936 ntBASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.11■□□□□ 0.97
YJEFN3A6XGL0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 UNC93B5-201ENST00000530315 699 ntBASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
YJEFN3A6XGL0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 AC092667.1-201ENST00000434301 2586 ntBASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 SMG8-203ENST00000578922 2178 ntBASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.09■□□□□ 0.97
YJEFN3A6XGL0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
YJEFN3A6XGL0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms