Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPVL3A0A0U1RRI6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CENPVL3A0A0U1RRI6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPVL3A0A0U1RRI6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPVL3A0A0U1RRI6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPVL3A0A0U1RRI6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CENPVL3A0A0U1RRI6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 RPPH1-201ENST00000516869 333 ntBASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 C1QBPP2-201ENST00000528754 825 ntBASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 AL359736.2-201ENST00000621992 437 ntBASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
CENPVL3A0A0U1RRI6 AL121603.2-201ENST00000557373 2117 ntBASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 AC006128.1-201ENST00000624704 1661 ntBASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 AC023632.3-201ENST00000521633 145 ntBASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPVL3A0A0U1RRI6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 FAM197Y4-202ENST00000622692 608 ntBASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 FP700111.2-201ENST00000619190 1892 ntBASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CENPVL3A0A0U1RRI6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 UBE2SP1-201ENST00000450587 669 ntBASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 AC005229.4-201ENST00000610085 2198 ntBASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPVL3A0A0U1RRI6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CENPVL3A0A0U1RRI6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms