Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC097381.1-201ENST00000429019 1296 ntBASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 CDV3P1-201ENST00000471403 739 ntBASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC087633.2-202ENST00000565166 1439 ntBASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV5-3A0A0A0MS03 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC005332.7-201ENST00000614046 2005 ntBASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV5-3A0A0A0MS03 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 AL356652.1-201ENST00000615962 565 ntBASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC098818.2-201ENST00000564925 2320 ntBASIC18.94■□□□□ 0.62
TRBV5-3A0A0A0MS03 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms