Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC109826.1-201ENST00000419865 1424 ntTSL 5 BASIC7.52□□□□□ -1.2
SNX18Q96RF0 AL008638.3-201ENST00000623027 5182 ntBASIC7.52□□□□□ -1.2
SNX18Q96RF0 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC7.52□□□□□ -1.2
SNX18Q96RF0 AL034417.4-202ENST00000642135 2236 ntBASIC7.52□□□□□ -1.2
SNX18Q96RF0 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SNX18Q96RF0 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC025040.2-201ENST00000558657 1852 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC008537.3-201ENST00000623128 1881 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AL136146.1-201ENST00000529830 1667 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 OR4N4-201ENST00000328795 1126 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 RN7SKP181-201ENST00000411188 316 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 RPSAP2-201ENST00000416785 888 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC110994.1-201ENST00000468519 406 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 RPL10P19-201ENST00000519013 301 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 IGLV3-7-201ENST00000522952 271 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC079598.4-201ENST00000549647 265 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC007952.7-201ENST00000583141 757 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 MIR5008-201ENST00000584300 94 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC104984.6-201ENST00000591928 360 ntTSL 3 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC005616.1-201ENST00000592931 579 ntTSL 4 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC005070.1-201ENST00000603744 365 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC007161.2-201ENST00000604734 1109 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC023983.2-201ENST00000608010 562 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AL136370.1-201ENST00000608166 691 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC135068.3-201ENST00000623441 1125 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC106733.1-201ENST00000624476 1038 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC087645.3-201ENST00000624708 587 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC022726.2-201ENST00000634673 547 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 AC091152.4-201ENST00000623480 3483 ntBASIC7.52□□□□□ -1.21
SNX18Q96RF0 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC7.52□□□□□ -1.21
SNX18Q96RF0 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNX18Q96RF0 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 RN7SKP75-201ENST00000363070 296 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 ARF1P1-201ENST00000406466 544 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC064862.3-201ENST00000411435 571 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC116609.1-201ENST00000425850 535 ntTSL 4 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AL032821.1-201ENST00000430895 581 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 LINC01830-201ENST00000450551 636 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 HAUS6P3-201ENST00000456660 1107 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC018638.4-201ENST00000465971 1150 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms