Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
UBE4BO95155 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
UBE4BO95155 FO393411.1-201ENST00000325612 420 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
UBE4BO95155 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.95□□□□□ -0.98
UBE4BO95155 AL049758.1-201ENST00000423154 397 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.95□□□□□ -0.98
UBE4BO95155 RPL22P11-201ENST00000434894 385 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 AL513318.1-201ENST00000437925 991 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 AL445686.1-201ENST00000443086 348 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 AC005840.2-201ENST00000447193 355 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC8.95□□□□□ -0.98
UBE4BO95155 COX7A2L-204ENST00000463055 540 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
UBE4BO95155 RPL7P21-201ENST00000478287 635 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 RN7SL687P-201ENST00000480496 285 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 CASC8-201ENST00000501396 930 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
UBE4BO95155 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC8.95□□□□□ -0.98
UBE4BO95155 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
UBE4BO95155 AC007346.1-202ENST00000602826 684 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 RN7SL715P-201ENST00000606972 286 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 RBM22P6-201ENST00000611682 867 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 AC084876.1-201ENST00000612793 641 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 AC245033.3-201ENST00000617986 224 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC8.95□□□□□ -0.98
UBE4BO95155 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
UBE4BO95155 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
UBE4BO95155 BCL9P1-201ENST00000506012 2561 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC8.95□□□□□ -0.98
UBE4BO95155 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
UBE4BO95155 AL139811.2-201ENST00000373465 1630 ntBASIC8.95□□□□□ -0.98
UBE4BO95155 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC8.95□□□□□ -0.98
UBE4BO95155 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
UBE4BO95155 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.94□□□□□ -0.98
UBE4BO95155 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.94□□□□□ -0.98
UBE4BO95155 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.94□□□□□ -0.98
UBE4BO95155 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.94□□□□□ -0.98
UBE4BO95155 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.94□□□□□ -0.98
UBE4BO95155 OR11G2-201ENST00000357366 1038 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
UBE4BO95155 RNVU1-15-201ENST00000384476 165 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
UBE4BO95155 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
UBE4BO95155 U3.34-201ENST00000408198 212 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 RNA5SP265-201ENST00000411023 111 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC8.94□□□□□ -0.98
UBE4BO95155 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC8.94□□□□□ -0.98
UBE4BO95155 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC8.94□□□□□ -0.98
UBE4BO95155 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.94□□□□□ -0.98
UBE4BO95155 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC8.94□□□□□ -0.98
UBE4BO95155 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC8.94□□□□□ -0.98
UBE4BO95155 RNU7-179P-201ENST00000516608 68 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC8.94□□□□□ -0.98
UBE4BO95155 AP003041.2-201ENST00000525666 1180 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 AC055716.1-201ENST00000550077 495 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC8.94□□□□□ -0.98
UBE4BO95155 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC8.94□□□□□ -0.98
UBE4BO95155 CYP4A44P-201ENST00000569984 154 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 AP001021.2-201ENST00000577935 544 ntTSL 5 BASIC8.94□□□□□ -0.98
UBE4BO95155 AC090287.1-201ENST00000578374 291 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC8.94□□□□□ -0.98
UBE4BO95155 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
UBE4BO95155 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC8.94□□□□□ -0.98
UBE4BO95155 SLC6A21P-201ENST00000599458 369 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 ZNF257-207ENST00000600162 817 ntTSL 3 BASIC8.94□□□□□ -0.98
UBE4BO95155 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.94□□□□□ -0.98
UBE4BO95155 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
UBE4BO95155 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
UBE4BO95155 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.94□□□□□ -0.98
UBE4BO95155 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.94□□□□□ -0.98
UBE4BO95155 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 PSMC1P3-201ENST00000453822 1318 ntBASIC8.94□□□□□ -0.98
UBE4BO95155 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
UBE4BO95155 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
UBE4BO95155 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
UBE4BO95155 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
UBE4BO95155 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
UBE4BO95155 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC8.93□□□□□ -0.98
UBE4BO95155 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.93□□□□□ -0.98
UBE4BO95155 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.93□□□□□ -0.98
UBE4BO95155 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.93□□□□□ -0.98
UBE4BO95155 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.93□□□□□ -0.98
UBE4BO95155 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
UBE4BO95155 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC8.93□□□□□ -0.98
UBE4BO95155 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
UBE4BO95155 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
UBE4BO95155 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
UBE4BO95155 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
UBE4BO95155 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
UBE4BO95155 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms