Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI2Q9Y5P3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 DUSP5P2-201ENST00000426873 1033 ntBASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 AC073210.2-201ENST00000430369 194 ntBASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAI2Q9Y5P3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 RNA5SP413-201ENST00000516373 109 ntBASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 AC092720.2-201ENST00000602388 1665 ntBASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.47■□□□□ 0.87
RAI2Q9Y5P3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 FEM1AP1-201ENST00000431297 1995 ntBASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 AC073314.1-201ENST00000568729 2216 ntBASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 AC091874.3-201ENST00000512672 1195 ntBASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 C2orf69P4-201ENST00000565394 541 ntBASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI2Q9Y5P3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms