Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 KRT8P36-201ENST00000489121 1440 ntBASIC26.62■■□□□ 1.85
SPG7Q9UQ90 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPG7Q9UQ90 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 TSPY15P-201ENST00000457163 923 ntBASIC26.6■■□□□ 1.85
SPG7Q9UQ90 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 MIR2861-201ENST00000636310 90 ntBASIC26.6■■□□□ 1.85
SPG7Q9UQ90 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.6■■□□□ 1.85
SPG7Q9UQ90 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SPG7Q9UQ90 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.59■■□□□ 1.85
SPG7Q9UQ90 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.59■■□□□ 1.85
SPG7Q9UQ90 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.59■■□□□ 1.85
SPG7Q9UQ90 Six3os1_6.1-201ENST00000620790 196 ntBASIC26.59■■□□□ 1.85
SPG7Q9UQ90 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SPG7Q9UQ90 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SPG7Q9UQ90 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
SPG7Q9UQ90 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SPG7Q9UQ90 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 AL355075.4-201ENST00000554988 638 ntBASIC26.57■■□□□ 1.84
SPG7Q9UQ90 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
SPG7Q9UQ90 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
SPG7Q9UQ90 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
SPG7Q9UQ90 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms