Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH9Q9ULB4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDH9Q9ULB4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDH9Q9ULB4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH9Q9ULB4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH9Q9ULB4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 KRT18P29-201ENST00000397031 1267 ntBASIC21.45■■□□□ 1.02
CDH9Q9ULB4 AL390719.1-204ENST00000412397 1219 ntBASIC21.45■■□□□ 1.02
CDH9Q9ULB4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 AC006058.3-201ENST00000606217 1069 ntBASIC21.45■■□□□ 1.02
CDH9Q9ULB4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH9Q9ULB4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 AC023632.3-201ENST00000521633 145 ntBASIC21.44■■□□□ 1.02
CDH9Q9ULB4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH9Q9ULB4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH9Q9ULB4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 AC128676.1-201ENST00000454392 318 ntBASIC21.42■■□□□ 1.02
CDH9Q9ULB4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH9Q9ULB4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms