Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 DUSP5P2-201ENST00000426873 1033 ntBASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
PRDM9Q9NQV7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
PRDM9Q9NQV7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PRDM9Q9NQV7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 AC097658.1-201ENST00000475555 843 ntBASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 AC091874.3-201ENST00000512672 1195 ntBASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.14■□□□□ 0.65
PRDM9Q9NQV7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 AC073314.1-201ENST00000568729 2216 ntBASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 SLC25A24-204ENST00000569674 2357 ntBASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM9Q9NQV7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 MYC-209ENST00000641252 345 ntBASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM9Q9NQV7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms