Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 AC061975.6-201ENST00000579045 1553 ntBASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 AL359736.2-201ENST00000621992 437 ntBASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1BQ9H9Y6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 AC060766.5-201ENST00000590539 871 ntBASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1BQ9H9Y6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 KRT17P1-201ENST00000399211 1546 ntBASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 MIR718-201ENST00000390190 70 ntBASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 HLA-B-256ENST00000639848 1089 ntBASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1BQ9H9Y6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 AC008403.3-201ENST00000598924 454 ntBASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 FAM21FP-204ENST00000608637 956 ntBASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 AC100791.3-201ENST00000617619 330 ntBASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1BQ9H9Y6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms