Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 AC093827.2-201ENST00000512654 315 ntBASIC20.23■□□□□ 0.83
HDAC8Q9BY41 RPPH1-201ENST00000516869 333 ntBASIC20.23■□□□□ 0.83
HDAC8Q9BY41 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC8Q9BY41 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.22■□□□□ 0.83
HDAC8Q9BY41 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC8Q9BY41 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC8Q9BY41 C1QBPP2-201ENST00000528754 825 ntBASIC20.22■□□□□ 0.83
HDAC8Q9BY41 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC8Q9BY41 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HDAC8Q9BY41 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC8Q9BY41 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC8Q9BY41 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 UBE2SP1-201ENST00000450587 669 ntBASIC20.21■□□□□ 0.83
HDAC8Q9BY41 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 MTDHP1-201ENST00000605323 784 ntBASIC20.21■□□□□ 0.83
HDAC8Q9BY41 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 AL121603.2-201ENST00000557373 2117 ntBASIC20.21■□□□□ 0.83
HDAC8Q9BY41 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC8Q9BY41 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC8Q9BY41 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC8Q9BY41 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 FAM197Y4-202ENST00000622692 608 ntBASIC20.18■□□□□ 0.82
HDAC8Q9BY41 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC8Q9BY41 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms