Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
RPAP1Q9BWH6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RPAP1Q9BWH6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
RPAP1Q9BWH6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
RPAP1Q9BWH6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RPAP1Q9BWH6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 AL596275.1-201ENST00000423464 877 ntBASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 RPS2P4-201ENST00000476944 856 ntBASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 AL359736.2-201ENST00000621992 437 ntBASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
RPAP1Q9BWH6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 AC121338.2-201ENST00000622535 1744 ntBASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
RPAP1Q9BWH6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 CYP21A1P-202ENST00000354927 1481 ntBASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 AC011484.1-201ENST00000377652 1995 ntBASIC24.62■■□□□ 1.53
RPAP1Q9BWH6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 LINC01006-201ENST00000333319 2292 ntBASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 KRT18P68-201ENST00000392293 1000 ntBASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 AC105020.6-201ENST00000621523 1217 ntBASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPAP1Q9BWH6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 AC008550.1-201ENST00000511500 884 ntBASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RPAP1Q9BWH6 FEM1AP1-201ENST00000431297 1995 ntBASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms