Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 AC005829.2-201ENST00000571422 1056 ntBASIC19.66■□□□□ 0.74
SLC38A3Q99624 FAM197Y4-202ENST00000622692 608 ntBASIC19.66■□□□□ 0.74
SLC38A3Q99624 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A3Q99624 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC38A3Q99624 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A3Q99624 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A3Q99624 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A3Q99624 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC38A3Q99624 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A3Q99624 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A3Q99624 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 C1QBPP2-201ENST00000528754 825 ntBASIC19.65■□□□□ 0.74
SLC38A3Q99624 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 AC006557.6-201ENST00000623071 864 ntBASIC19.65■□□□□ 0.74
SLC38A3Q99624 MIR2861-201ENST00000636310 90 ntBASIC19.65■□□□□ 0.74
SLC38A3Q99624 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A3Q99624 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SLC38A3Q99624 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
SLC38A3Q99624 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SLC38A3Q99624 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC38A3Q99624 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC38A3Q99624 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SLC38A3Q99624 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.64■□□□□ 0.73
SLC38A3Q99624 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC38A3Q99624 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC38A3Q99624 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SLC38A3Q99624 AC069544.1-201ENST00000609399 999 ntBASIC19.64■□□□□ 0.73
SLC38A3Q99624 AL359736.2-201ENST00000621992 437 ntBASIC19.64■□□□□ 0.73
SLC38A3Q99624 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC38A3Q99624 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SLC38A3Q99624 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A3Q99624 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC38A3Q99624 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A3Q99624 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A3Q99624 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A3Q99624 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A3Q99624 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SLC38A3Q99624 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC38A3Q99624 KRT8P36-201ENST00000489121 1440 ntBASIC19.63■□□□□ 0.73
SLC38A3Q99624 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC38A3Q99624 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A3Q99624 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A3Q99624 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A3Q99624 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC38A3Q99624 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A3Q99624 FEM1AP4-201ENST00000443167 1987 ntBASIC19.63■□□□□ 0.73
SLC38A3Q99624 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A3Q99624 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A3Q99624 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SLC38A3Q99624 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SLC38A3Q99624 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SLC38A3Q99624 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SLC38A3Q99624 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC38A3Q99624 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SLC38A3Q99624 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC38A3Q99624 UBE2SP1-201ENST00000450587 669 ntBASIC19.62■□□□□ 0.73
SLC38A3Q99624 RPPH1-201ENST00000516869 333 ntBASIC19.62■□□□□ 0.73
SLC38A3Q99624 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC38A3Q99624 AC233263.1-201ENST00000578059 224 ntBASIC19.62■□□□□ 0.73
SLC38A3Q99624 RN7SL471P-201ENST00000580476 299 ntBASIC19.62■□□□□ 0.73
SLC38A3Q99624 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A3Q99624 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A3Q99624 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A3Q99624 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SLC38A3Q99624 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A3Q99624 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A3Q99624 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC38A3Q99624 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SLC38A3Q99624 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms