Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 ESRRAP1-201ENST00000400596 1257 ntBASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 AP003097.1-201ENST00000530657 1135 ntBASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCD1Q96GM5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 AC026366.1-201ENST00000488803 879 ntBASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCD1Q96GM5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 AC005829.2-201ENST00000571422 1056 ntBASIC21.33■■□□□ 1.01
SMARCD1Q96GM5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.33■■□□□ 1
SMARCD1Q96GM5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMARCD1Q96GM5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCD1Q96GM5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCD1Q96GM5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 UNC93B4-201ENST00000505679 747 ntBASIC21.32■■□□□ 1
SMARCD1Q96GM5 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCD1Q96GM5 SOX15-203ENST00000570788 1093 ntBASIC21.32■■□□□ 1
SMARCD1Q96GM5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCD1Q96GM5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCD1Q96GM5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.32■■□□□ 1
SMARCD1Q96GM5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.31■■□□□ 1
SMARCD1Q96GM5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.31■■□□□ 1
SMARCD1Q96GM5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.31■■□□□ 1
SMARCD1Q96GM5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.31■■□□□ 1
SMARCD1Q96GM5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCD1Q96GM5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.31■■□□□ 1
SMARCD1Q96GM5 AL390719.1-204ENST00000412397 1219 ntBASIC21.31■■□□□ 1
SMARCD1Q96GM5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SMARCD1Q96GM5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.31■■□□□ 1
SMARCD1Q96GM5 AC023632.3-201ENST00000521633 145 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms