Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 AL135905.2-201ENST00000584934 1404 ntBASIC17.6■□□□□ 0.41
LINC01560Q8TB33 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 TSPY15P-201ENST00000457163 923 ntBASIC17.59■□□□□ 0.41
LINC01560Q8TB33 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 LINC01023-201ENST00000606054 436 ntBASIC17.59■□□□□ 0.41
LINC01560Q8TB33 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 AC113410.3-201ENST00000623366 203 ntBASIC17.59■□□□□ 0.41
LINC01560Q8TB33 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01560Q8TB33 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LINC01560Q8TB33 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LINC01560Q8TB33 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.58■□□□□ 0.41
LINC01560Q8TB33 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.58■□□□□ 0.41
LINC01560Q8TB33 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01560Q8TB33 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.58■□□□□ 0.41
LINC01560Q8TB33 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01560Q8TB33 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01560Q8TB33 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01560Q8TB33 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01560Q8TB33 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 AC244015.2-201ENST00000616358 1861 ntBASIC17.57■□□□□ 0.4
LINC01560Q8TB33 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 MIR4785-201ENST00000585005 73 ntBASIC17.57■□□□□ 0.4
LINC01560Q8TB33 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01560Q8TB33 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 AC124283.5-201ENST00000624661 1809 ntBASIC17.56■□□□□ 0.4
LINC01560Q8TB33 FBXW4P1-201ENST00000426721 2239 ntBASIC17.56■□□□□ 0.4
LINC01560Q8TB33 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 AC027702.1-201ENST00000563810 1770 ntBASIC17.56■□□□□ 0.4
LINC01560Q8TB33 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms