Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
USP48Q86UV5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC24.83■■□□□ 1.57
USP48Q86UV5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
USP48Q86UV5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
USP48Q86UV5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.83■■□□□ 1.57
USP48Q86UV5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
USP48Q86UV5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
USP48Q86UV5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP48Q86UV5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
USP48Q86UV5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP48Q86UV5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
USP48Q86UV5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
USP48Q86UV5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP48Q86UV5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.82■■□□□ 1.56
USP48Q86UV5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.82■■□□□ 1.56
USP48Q86UV5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.82■■□□□ 1.56
USP48Q86UV5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP48Q86UV5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP48Q86UV5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
USP48Q86UV5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.81■■□□□ 1.56
USP48Q86UV5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
USP48Q86UV5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
USP48Q86UV5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.81■■□□□ 1.56
USP48Q86UV5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.81■■□□□ 1.56
USP48Q86UV5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.81■■□□□ 1.56
USP48Q86UV5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 AL157384.1-201ENST00000445995 2473 ntBASIC24.81■■□□□ 1.56
USP48Q86UV5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
USP48Q86UV5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
USP48Q86UV5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.8■■□□□ 1.56
USP48Q86UV5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.8■■□□□ 1.56
USP48Q86UV5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
USP48Q86UV5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.8■■□□□ 1.56
USP48Q86UV5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24.8■■□□□ 1.56
USP48Q86UV5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.8■■□□□ 1.56
USP48Q86UV5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
USP48Q86UV5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
USP48Q86UV5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.8■■□□□ 1.56
USP48Q86UV5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
USP48Q86UV5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP48Q86UV5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.8■■□□□ 1.56
USP48Q86UV5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
USP48Q86UV5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP48Q86UV5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP48Q86UV5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP48Q86UV5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
USP48Q86UV5 AC087499.1-201ENST00000418141 1075 ntBASIC24.79■■□□□ 1.56
USP48Q86UV5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.79■■□□□ 1.56
USP48Q86UV5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.79■■□□□ 1.56
USP48Q86UV5 AC245052.3-201ENST00000450182 901 ntBASIC24.79■■□□□ 1.56
USP48Q86UV5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP48Q86UV5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC24.79■■□□□ 1.56
USP48Q86UV5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP48Q86UV5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.79■■□□□ 1.56
USP48Q86UV5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.79■■□□□ 1.56
USP48Q86UV5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
USP48Q86UV5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
USP48Q86UV5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.79■■□□□ 1.56
USP48Q86UV5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.79■■□□□ 1.56
USP48Q86UV5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
USP48Q86UV5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.79■■□□□ 1.56
USP48Q86UV5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.79■■□□□ 1.56
USP48Q86UV5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.78■■□□□ 1.56
USP48Q86UV5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.78■■□□□ 1.56
USP48Q86UV5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP48Q86UV5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP48Q86UV5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
USP48Q86UV5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP48Q86UV5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP48Q86UV5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
USP48Q86UV5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC24.78■■□□□ 1.56
USP48Q86UV5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP48Q86UV5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP48Q86UV5 AL049637.2-201ENST00000641778 930 ntBASIC24.78■■□□□ 1.56
USP48Q86UV5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
USP48Q86UV5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
USP48Q86UV5 AC003102.1-202ENST00000563394 1796 ntBASIC24.77■■□□□ 1.56
USP48Q86UV5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.77■■□□□ 1.56
USP48Q86UV5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP48Q86UV5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP48Q86UV5 RCN1P1-201ENST00000400413 996 ntBASIC24.77■■□□□ 1.56
USP48Q86UV5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms