Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 AC069152.1-201ENST00000438030 544 ntBASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 AC091874.3-201ENST00000512672 1195 ntBASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 MYC-209ENST00000641252 345 ntBASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 AC133041.1-202ENST00000642053 222 ntBASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R3AQ6IN85 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 AL355802.2-201ENST00000402069 882 ntBASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 DUSP5P2-201ENST00000426873 1033 ntBASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 C2orf69P4-201ENST00000565394 541 ntBASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 FEM1AP1-201ENST00000431297 1995 ntBASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PPP4R3AQ6IN85 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 SERPINH1P1-201ENST00000419794 1249 ntBASIC23■■□□□ 1.27
PPP4R3AQ6IN85 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 OR2A1-AS1-201ENST00000462305 773 ntBASIC23■■□□□ 1.27
PPP4R3AQ6IN85 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 AC098934.4-201ENST00000564127 592 ntBASIC23■■□□□ 1.27
PPP4R3AQ6IN85 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PPP4R3AQ6IN85 AP005212.1-201ENST00000581547 1997 ntBASIC23■■□□□ 1.27
PPP4R3AQ6IN85 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 AC092720.2-201ENST00000602388 1665 ntBASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPP4R3AQ6IN85 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 AC073314.1-201ENST00000568729 2216 ntBASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP4R3AQ6IN85 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PPP4R3AQ6IN85 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PPP4R3AQ6IN85 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PPP4R3AQ6IN85 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms