Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 AP003097.1-201ENST00000530657 1135 ntBASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39AQ5SRH9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 AC026366.1-201ENST00000488803 879 ntBASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
TTC39AQ5SRH9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 SOX15-203ENST00000570788 1093 ntBASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 TMEM191A-211ENST00000637163 1067 ntBASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39AQ5SRH9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39AQ5SRH9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 UNC93B4-201ENST00000505679 747 ntBASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 AC008403.3-201ENST00000598924 454 ntBASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.65■■□□□ 1.54
TTC39AQ5SRH9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms