Protein–RNA interactions for Protein: Q03855

TY1B-DR1, Transposon Ty1-DR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR1Q03855 YHL002C-AYHL002C-A 489 nt0.11□□□□□ -2.39
TY1B-DR1Q03855 YHR212CYHR212C 336 nt0.11□□□□□ -2.39
TY1B-DR1Q03855 VPS25YJR102C 609 nt0.11□□□□□ -2.39
TY1B-DR1Q03855 YAR060CYAR060C 336 nt0.11□□□□□ -2.39
TY1B-DR1Q03855 RPL9BYNL067W 576 nt0.11□□□□□ -2.39
TY1B-DR1Q03855 HDA3YPR179C 1968 nt0.11□□□□□ -2.39
TY1B-DR1Q03855 UTP10YJL109C 5310 nt0.11□□□□□ -2.39
TY1B-DR1Q03855 SGD1YLR336C 2700 nt0.1□□□□□ -2.39
TY1B-DR1Q03855 TSA2YDR453C 591 nt0.1□□□□□ -2.39
TY1B-DR1Q03855 SEC5YDR166C 2916 nt0.09□□□□□ -2.39
TY1B-DR1Q03855 MVB12YGR206W 306 nt0.09□□□□□ -2.39
TY1B-DR1Q03855 RSM27YGR215W 333 nt0.09□□□□□ -2.39
TY1B-DR1Q03855 HSK3YKL138C-A 210 nt0.09□□□□□ -2.39
TY1B-DR1Q03855 YOL013W-AYOL013W-A 192 nt0.09□□□□□ -2.39
TY1B-DR1Q03855 DUO1YGL061C 744 nt0.09□□□□□ -2.4
TY1B-DR1Q03855 YHL012WYHL012W 1482 nt0.08□□□□□ -2.4
TY1B-DR1Q03855 PGA1YNL158W 597 nt0.08□□□□□ -2.4
TY1B-DR1Q03855 TOF2YKR010C 2316 nt0.08□□□□□ -2.4
TY1B-DR1Q03855 NNF2YGR089W 2811 nt0.08□□□□□ -2.4
TY1B-DR1Q03855 YCR090CYCR090C 549 nt0.07□□□□□ -2.4
TY1B-DR1Q03855 TAP42YMR028W 1101 nt0.07□□□□□ -2.4
TY1B-DR1Q03855 YMR324CYMR324C 243 nt0.06□□□□□ -2.4
TY1B-DR1Q03855 TEX1YNL253W 1269 nt0.06□□□□□ -2.4
TY1B-DR1Q03855 BMT5YIL096C 1011 nt0.06□□□□□ -2.4
TY1B-DR1Q03855 SST2YLR452C 2097 nt0.06□□□□□ -2.4
TY1B-DR1Q03855 SLS1YLR139C 1932 nt0.06□□□□□ -2.4
TY1B-DR1Q03855 OSH6YKR003W 1347 nt0.06□□□□□ -2.4
TY1B-DR1Q03855 SWF1YDR126W 1011 nt0.05□□□□□ -2.4
TY1B-DR1Q03855 TMA20YER007C-A 546 nt0.05□□□□□ -2.4
TY1B-DR1Q03855 SDL1YIL167W 633 nt0.05□□□□□ -2.4
TY1B-DR1Q03855 IZH4YOL101C 939 nt0.05□□□□□ -2.4
TY1B-DR1Q03855 YBR012CYBR012C 420 nt0.05□□□□□ -2.4
TY1B-DR1Q03855 YOR282WYOR282W 321 nt0.05□□□□□ -2.4
TY1B-DR1Q03855 TRS20YBR254C 528 nt0.05□□□□□ -2.4
TY1B-DR1Q03855 NDD1YOR372C 1665 nt0.05□□□□□ -2.4
TY1B-DR1Q03855 AFR1YDR085C 1863 nt0.05□□□□□ -2.4
TY1B-DR1Q03855 YPD1YDL235C 504 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 YFL012W-AYFL012W-A 375 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 COG7YGL005C 840 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 YGL006W-AYGL006W-A 111 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 COX6YHR051W 447 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 YOR394C-AYOR394C-A 168 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 LOA1YPR139C 903 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 YDL206WYDL206W 2289 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 CYC7YEL039C 342 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 RCN1YKL159C 636 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 YLR042CYLR042C 486 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 YOL050CYOL050C 321 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 NUT2YPR168W 474 nt0.04□□□□□ -2.4
TY1B-DR1Q03855 MUD2YKL074C 1584 nt0.03□□□□□ -2.4
TY1B-DR1Q03855 VIK1YPL253C 1944 nt0.03□□□□□ -2.4
TY1B-DR1Q03855 YCR043CYCR043C 384 nt0.02□□□□□ -2.41
TY1B-DR1Q03855 YDR003W-AYDR003W-A 123 nt0.02□□□□□ -2.41
TY1B-DR1Q03855 YDR509WYDR509W 348 nt0.01□□□□□ -2.41
TY1B-DR1Q03855 RPC25YKL144C 639 nt0.01□□□□□ -2.41
TY1B-DR1Q03855 YLR225CYLR225C 1224 nt0.01□□□□□ -2.41
TY1B-DR1Q03855 POP8YBL018C 402 nt0.01□□□□□ -2.41
TY1B-DR1Q03855 PIG1YLR273C 1947 nt0.01□□□□□ -2.41
TY1B-DR1Q03855 RPL35BYDL136W 363 nt0.01□□□□□ -2.41
TY1B-DR1Q03855 SLI15YBR156C 2097 nt0□□□□□ -2.41
TY1B-DR1Q03855 NUR1YDL089W 1455 nt0□□□□□ -2.41
TY1B-DR1Q03855 YHR063W-AYHR063W-A 336 nt0□□□□□ -2.41
TY1B-DR1Q03855 YML047W-AYML047W-A 366 nt0□□□□□ -2.41
TY1B-DR1Q03855 YPL034WYPL034W 498 nt0□□□□□ -2.41
TY1B-DR1Q03855 MPT5YGL178W 2580 nt-0.01□□□□□ -2.41
TY1B-DR1Q03855 NBP1YLR457C 960 nt-0.01□□□□□ -2.41
TY1B-DR1Q03855 CGI121YML036W 546 nt-0.01□□□□□ -2.41
TY1B-DR1Q03855 RPL32YBL092W 393 nt-0.01□□□□□ -2.41
TY1B-DR1Q03855 YOL085W-AYOL085W-A 213 nt-0.01□□□□□ -2.41
TY1B-DR1Q03855 SLM6YBR266C 453 nt-0.01□□□□□ -2.41
TY1B-DR1Q03855 MKT1YNL085W 2493 nt-0.02□□□□□ -2.41
TY1B-DR1Q03855 YBL100W-BYBL100W-B 5313 nt-0.02□□□□□ -2.41
TY1B-DR1Q03855 GIC2YDR309C 1152 nt-0.02□□□□□ -2.41
TY1B-DR1Q03855 GRX8YLR364W 330 nt-0.02□□□□□ -2.41
TY1B-DR1Q03855 YJL049WYJL049W 1353 nt-0.03□□□□□ -2.41
TY1B-DR1Q03855 ALG13YGL047W 609 nt-0.03□□□□□ -2.41
TY1B-DR1Q03855 YJR071WYJR071W 369 nt-0.03□□□□□ -2.41
TY1B-DR1Q03855 YAL069WYAL069W 315 nt-0.03□□□□□ -2.41
TY1B-DR1Q03855 ATX1YNL259C 222 nt-0.03□□□□□ -2.41
TY1B-DR1Q03855 YPL060C-AYPL060C-A 3315 nt-0.03□□□□□ -2.41
TY1B-DR1Q03855 YEL030C-AYEL030C-A 315 nt-0.04□□□□□ -2.42
TY1B-DR1Q03855 GPX2YBR244W 489 nt-0.04□□□□□ -2.42
TY1B-DR1Q03855 DBP6YNR038W 1890 nt-0.04□□□□□ -2.42
TY1B-DR1Q03855 VPS74YDR372C 1038 nt-0.04□□□□□ -2.42
TY1B-DR1Q03855 RPL37AYLR185W 267 nt-0.04□□□□□ -2.42
TY1B-DR1Q03855 AIM41YOR215C 558 nt-0.04□□□□□ -2.42
TY1B-DR1Q03855 HAL9YOL089C 3093 nt-0.04□□□□□ -2.42
TY1B-DR1Q03855 PXA2YKL188C 2562 nt-0.05□□□□□ -2.42
TY1B-DR1Q03855 VPS52YDR484W 1926 nt-0.05□□□□□ -2.42
TY1B-DR1Q03855 RPL35AYDL191W 363 nt-0.05□□□□□ -2.42
TY1B-DR1Q03855 IMP3YHR148W 552 nt-0.05□□□□□ -2.42
TY1B-DR1Q03855 HYM1YKL189W 1200 nt-0.05□□□□□ -2.42
TY1B-DR1Q03855 YOL150CYOL150C 312 nt-0.05□□□□□ -2.42
TY1B-DR1Q03855 snR190snR190 190 nt-0.06□□□□□ -2.42
TY1B-DR1Q03855 YOR192C-AYOR192C-A 1317 nt-0.06□□□□□ -2.42
TY1B-DR1Q03855 AIM44YPL158C 2277 nt-0.06□□□□□ -2.42
TY1B-DR1Q03855 ISD11YER048W-A 285 nt-0.06□□□□□ -2.42
TY1B-DR1Q03855 YGR219WYGR219W 342 nt-0.06□□□□□ -2.42
TY1B-DR1Q03855 snR63snR63 255 nt-0.07□□□□□ -2.42
TY1B-DR1Q03855 SDH2YLL041C 801 nt-0.07□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms