Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.81■□□□□ 0.44
UBE2NP61088 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.81■□□□□ 0.44
UBE2NP61088 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2NP61088 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2NP61088 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2NP61088 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
UBE2NP61088 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.81■□□□□ 0.44
UBE2NP61088 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.81■□□□□ 0.44
UBE2NP61088 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
UBE2NP61088 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.81■□□□□ 0.44
UBE2NP61088 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2NP61088 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.81■□□□□ 0.44
UBE2NP61088 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2NP61088 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2NP61088 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2NP61088 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
UBE2NP61088 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2NP61088 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
UBE2NP61088 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.81■□□□□ 0.44
UBE2NP61088 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
UBE2NP61088 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2NP61088 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2NP61088 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UBE2NP61088 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.8■□□□□ 0.44
UBE2NP61088 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.8■□□□□ 0.44
UBE2NP61088 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 AC091874.3-201ENST00000512672 1195 ntBASIC17.8■□□□□ 0.44
UBE2NP61088 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2NP61088 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2NP61088 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2NP61088 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBE2NP61088 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
UBE2NP61088 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2NP61088 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UBE2NP61088 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
UBE2NP61088 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
UBE2NP61088 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.79■□□□□ 0.44
UBE2NP61088 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 AC138932.1-201ENST00000534164 6830 ntBASIC17.79■□□□□ 0.44
UBE2NP61088 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 AC098934.4-201ENST00000564127 592 ntBASIC17.79■□□□□ 0.44
UBE2NP61088 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.79■□□□□ 0.44
UBE2NP61088 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2NP61088 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
UBE2NP61088 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2NP61088 FP700111.2-201ENST00000619190 1892 ntBASIC17.79■□□□□ 0.44
UBE2NP61088 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 AL137060.1-201ENST00000618151 2648 ntBASIC17.79■□□□□ 0.44
UBE2NP61088 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2NP61088 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
UBE2NP61088 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
UBE2NP61088 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.78■□□□□ 0.44
UBE2NP61088 SLC25A24-204ENST00000569674 2357 ntBASIC17.78■□□□□ 0.44
UBE2NP61088 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
UBE2NP61088 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.78■□□□□ 0.44
UBE2NP61088 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBE2NP61088 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
UBE2NP61088 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.78■□□□□ 0.44
UBE2NP61088 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBE2NP61088 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.78■□□□□ 0.44
UBE2NP61088 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2NP61088 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBE2NP61088 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
UBE2NP61088 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2NP61088 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2NP61088 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.77■□□□□ 0.44
UBE2NP61088 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UBE2NP61088 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2NP61088 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
UBE2NP61088 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
UBE2NP61088 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2NP61088 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.77■□□□□ 0.44
UBE2NP61088 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2NP61088 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2NP61088 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
UBE2NP61088 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.77■□□□□ 0.44
UBE2NP61088 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms