Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.66■■□□□ 1.06
RAD23BP54727 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAD23BP54727 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAD23BP54727 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RAD23BP54727 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.66■■□□□ 1.06
RAD23BP54727 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAD23BP54727 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.65■■□□□ 1.06
RAD23BP54727 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.65■■□□□ 1.06
RAD23BP54727 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.65■■□□□ 1.06
RAD23BP54727 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.65■■□□□ 1.06
RAD23BP54727 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.65■■□□□ 1.06
RAD23BP54727 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.65■■□□□ 1.06
RAD23BP54727 AL138781.1-201ENST00000566567 1274 ntBASIC21.65■■□□□ 1.06
RAD23BP54727 AL589743.5-201ENST00000616611 1050 ntBASIC21.65■■□□□ 1.06
RAD23BP54727 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
RAD23BP54727 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAD23BP54727 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.64■■□□□ 1.06
RAD23BP54727 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RAD23BP54727 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAD23BP54727 AL157384.1-201ENST00000445995 2473 ntBASIC21.64■■□□□ 1.05
RAD23BP54727 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RAD23BP54727 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAD23BP54727 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAD23BP54727 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAD23BP54727 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RAD23BP54727 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.64■■□□□ 1.05
RAD23BP54727 LSM12P1-201ENST00000411836 588 ntBASIC21.64■■□□□ 1.05
RAD23BP54727 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.64■■□□□ 1.05
RAD23BP54727 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.64■■□□□ 1.05
RAD23BP54727 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.64■■□□□ 1.05
RAD23BP54727 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RAD23BP54727 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAD23BP54727 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.64■■□□□ 1.05
RAD23BP54727 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.63■■□□□ 1.05
RAD23BP54727 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.63■■□□□ 1.05
RAD23BP54727 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 AP005212.1-201ENST00000581547 1997 ntBASIC21.63■■□□□ 1.05
RAD23BP54727 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.63■■□□□ 1.05
RAD23BP54727 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.63■■□□□ 1.05
RAD23BP54727 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.63■■□□□ 1.05
RAD23BP54727 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.63■■□□□ 1.05
RAD23BP54727 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RAD23BP54727 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.63■■□□□ 1.05
RAD23BP54727 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.63■■□□□ 1.05
RAD23BP54727 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.63■■□□□ 1.05
RAD23BP54727 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.63■■□□□ 1.05
RAD23BP54727 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.63■■□□□ 1.05
RAD23BP54727 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.63■■□□□ 1.05
RAD23BP54727 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAD23BP54727 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RAD23BP54727 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RAD23BP54727 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RAD23BP54727 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.62■■□□□ 1.05
RAD23BP54727 AC098934.4-201ENST00000564127 592 ntBASIC21.62■■□□□ 1.05
RAD23BP54727 AC142086.2-201ENST00000569753 217 ntBASIC21.62■■□□□ 1.05
RAD23BP54727 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RAD23BP54727 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
RAD23BP54727 AC092118.2-201ENST00000613495 667 ntBASIC21.62■■□□□ 1.05
RAD23BP54727 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.62■■□□□ 1.05
RAD23BP54727 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.62■■□□□ 1.05
RAD23BP54727 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RAD23BP54727 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.62■■□□□ 1.05
RAD23BP54727 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAD23BP54727 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms