Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PMS2P54278 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.86■□□□□ 0.93
PMS2P54278 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 AC027612.3-201ENST00000413684 1047 ntBASIC20.86■□□□□ 0.93
PMS2P54278 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.86■□□□□ 0.93
PMS2P54278 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.86■□□□□ 0.93
PMS2P54278 IGHV3-19-201ENST00000521488 291 ntBASIC20.86■□□□□ 0.93
PMS2P54278 IKBKGP1-201ENST00000612193 1073 ntBASIC20.86■□□□□ 0.93
PMS2P54278 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.86■□□□□ 0.93
PMS2P54278 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PMS2P54278 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.86■□□□□ 0.93
PMS2P54278 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMS2P54278 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.85■□□□□ 0.93
PMS2P54278 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.85■□□□□ 0.93
PMS2P54278 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.85■□□□□ 0.93
PMS2P54278 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PMS2P54278 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PMS2P54278 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PMS2P54278 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PMS2P54278 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PMS2P54278 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 AC123595.1-201ENST00000440769 1046 ntBASIC20.85■□□□□ 0.93
PMS2P54278 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.85■□□□□ 0.93
PMS2P54278 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.85■□□□□ 0.93
PMS2P54278 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
PMS2P54278 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.85■□□□□ 0.93
PMS2P54278 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
PMS2P54278 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.85■□□□□ 0.93
PMS2P54278 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
PMS2P54278 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.85■□□□□ 0.93
PMS2P54278 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
PMS2P54278 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.85■□□□□ 0.93
PMS2P54278 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS2P54278 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PMS2P54278 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PMS2P54278 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PMS2P54278 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
PMS2P54278 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.84■□□□□ 0.93
PMS2P54278 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.84■□□□□ 0.93
PMS2P54278 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.84■□□□□ 0.93
PMS2P54278 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.84■□□□□ 0.93
PMS2P54278 DUX4L2-201ENST00000561772 1275 ntBASIC20.84■□□□□ 0.93
PMS2P54278 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.84■□□□□ 0.93
PMS2P54278 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
PMS2P54278 DUX4L6-201ENST00000626483 1275 ntBASIC20.84■□□□□ 0.93
PMS2P54278 DUX4L1-201ENST00000627662 1275 ntBASIC20.84■□□□□ 0.93
PMS2P54278 DUX4L8-201ENST00000629013 1275 ntBASIC20.84■□□□□ 0.93
PMS2P54278 DUX4L3-201ENST00000630187 1275 ntBASIC20.84■□□□□ 0.93
PMS2P54278 DUX4L7-201ENST00000630678 1275 ntBASIC20.84■□□□□ 0.93
PMS2P54278 DUX4L5-201ENST00000630834 1275 ntBASIC20.84■□□□□ 0.93
PMS2P54278 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS2P54278 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PMS2P54278 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.83■□□□□ 0.93
PMS2P54278 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS2P54278 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.83■□□□□ 0.93
PMS2P54278 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS2P54278 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PMS2P54278 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.83■□□□□ 0.93
PMS2P54278 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS2P54278 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS2P54278 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms