Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC29.27■■■□□ 2.28
CLTCL1P53675 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC29.27■■■□□ 2.28
CLTCL1P53675 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC29.27■■■□□ 2.28
CLTCL1P53675 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC29.27■■■□□ 2.28
CLTCL1P53675 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC29.27■■■□□ 2.28
CLTCL1P53675 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC29.27■■■□□ 2.28
CLTCL1P53675 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC29.27■■■□□ 2.28
CLTCL1P53675 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.28
CLTCL1P53675 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC29.26■■■□□ 2.28
CLTCL1P53675 AC012676.1-201ENST00000574705 1949 ntBASIC29.26■■■□□ 2.28
CLTCL1P53675 AL049796.1-201ENST00000565336 1766 ntBASIC29.26■■■□□ 2.27
CLTCL1P53675 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC29.26■■■□□ 2.27
CLTCL1P53675 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC29.26■■■□□ 2.27
CLTCL1P53675 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 CABP2-204ENST00000636477 941 ntTSL 5 BASIC29.26■■■□□ 2.27
CLTCL1P53675 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CLTCL1P53675 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC29.26■■■□□ 2.27
CLTCL1P53675 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
CLTCL1P53675 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CLTCL1P53675 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
CLTCL1P53675 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC29.25■■■□□ 2.27
CLTCL1P53675 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC29.25■■■□□ 2.27
CLTCL1P53675 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
CLTCL1P53675 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CLTCL1P53675 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC29.25■■■□□ 2.27
CLTCL1P53675 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CLTCL1P53675 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CLTCL1P53675 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CLTCL1P53675 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
CLTCL1P53675 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC29.25■■■□□ 2.27
CLTCL1P53675 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CLTCL1P53675 TREX2-204ENST00000370212 861 ntTSL 5 BASIC29.24■■■□□ 2.27
CLTCL1P53675 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
CLTCL1P53675 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
CLTCL1P53675 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC29.24■■■□□ 2.27
CLTCL1P53675 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC29.24■■■□□ 2.27
CLTCL1P53675 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC29.24■■■□□ 2.27
CLTCL1P53675 MIR4785-201ENST00000585005 73 ntBASIC29.24■■■□□ 2.27
CLTCL1P53675 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC29.24■■■□□ 2.27
CLTCL1P53675 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CLTCL1P53675 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CLTCL1P53675 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CLTCL1P53675 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CLTCL1P53675 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC29.23■■■□□ 2.27
CLTCL1P53675 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 LINC01023-201ENST00000606054 436 ntBASIC29.23■■■□□ 2.27
CLTCL1P53675 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC29.23■■■□□ 2.27
CLTCL1P53675 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 FBXW4P1-201ENST00000426721 2239 ntBASIC29.23■■■□□ 2.27
CLTCL1P53675 AL135905.2-201ENST00000584934 1404 ntBASIC29.23■■■□□ 2.27
CLTCL1P53675 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC29.23■■■□□ 2.27
CLTCL1P53675 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC29.23■■■□□ 2.27
CLTCL1P53675 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC29.23■■■□□ 2.27
CLTCL1P53675 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CLTCL1P53675 PRKY-204ENST00000533551 1019 ntBASIC29.23■■■□□ 2.27
CLTCL1P53675 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC29.23■■■□□ 2.27
CLTCL1P53675 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
CLTCL1P53675 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC29.22■■■□□ 2.27
CLTCL1P53675 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CLTCL1P53675 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CLTCL1P53675 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC29.22■■■□□ 2.27
CLTCL1P53675 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC29.22■■■□□ 2.27
CLTCL1P53675 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC29.22■■■□□ 2.27
CLTCL1P53675 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC29.22■■■□□ 2.27
CLTCL1P53675 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CLTCL1P53675 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CLTCL1P53675 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CLTCL1P53675 AC087499.1-201ENST00000418141 1075 ntBASIC29.21■■■□□ 2.27
CLTCL1P53675 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC29.21■■■□□ 2.27
CLTCL1P53675 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC29.21■■■□□ 2.27
CLTCL1P53675 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CLTCL1P53675 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
CLTCL1P53675 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms