Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 YAL037C-AYAL037C-A 93 nt3.2□□□□□ -1.9
NRD1P53617 YAL067W-AYAL067W-A 228 nt3.2□□□□□ -1.9
NRD1P53617 YPR203WYPR203W 309 nt3.2□□□□□ -1.9 RIP-Chip
NRD1P53617 TAF6YGL112C 1551 nt3.2□□□□□ -1.9
NRD1P53617 MYO3YKL129C 3819 nt3.2□□□□□ -1.9
NRD1P53617 EBS1YDR206W 2655 nt3.19□□□□□ -1.9
NRD1P53617 YOL019W-AYOL019W-A 153 nt3.19□□□□□ -1.9
NRD1P53617 PLC1YPL268W 2610 nt3.19□□□□□ -1.9 RIP-Chip
NRD1P53617 CWH41YGL027C 2502 nt3.19□□□□□ -1.9
NRD1P53617 GLC3YEL011W 2115 nt3.19□□□□□ -1.9
NRD1P53617 YGL024WYGL024W 336 nt3.18□□□□□ -1.9
NRD1P53617 tQ(UUG)BtQ(UUG)B 72 nt3.18□□□□□ -1.9
NRD1P53617 YKR075W-AYKR075W-A 270 nt3.18□□□□□ -1.9
NRD1P53617 YOR218CYOR218C 420 nt3.18□□□□□ -1.9
NRD1P53617 FLO9YAL063C 3969 nt3.18□□□□□ -1.9
NRD1P53617 STE6YKL209C 3873 nt3.18□□□□□ -1.9
NRD1P53617 SEA4YBL104C 3117 nt3.17□□□□□ -1.9
NRD1P53617 tC(GCA)BtC(GCA)B 72 nt3.17□□□□□ -1.9
NRD1P53617 tC(GCA)GtC(GCA)G 72 nt3.17□□□□□ -1.9
NRD1P53617 tC(GCA)P1tC(GCA)P1 72 nt3.17□□□□□ -1.9
NRD1P53617 tC(GCA)P2tC(GCA)P2 72 nt3.17□□□□□ -1.9
NRD1P53617 tF(GAA)DtF(GAA)D 73 nt3.17□□□□□ -1.9
NRD1P53617 tF(GAA)NtF(GAA)N 73 nt3.17□□□□□ -1.9
NRD1P53617 FPR1YNL135C 345 nt3.17□□□□□ -1.9
NRD1P53617 YOR072W-BYOR072W-B 162 nt3.17□□□□□ -1.9
NRD1P53617 MPT5YGL178W 2580 nt3.17□□□□□ -1.9
NRD1P53617 CTF4YPR135W 2784 nt3.17□□□□□ -1.9
NRD1P53617 FUN12YAL035W 3009 nt3.17□□□□□ -1.9
NRD1P53617 YHR080CYHR080C 4038 nt3.16□□□□□ -1.9
NRD1P53617 EMC1YCL045C 2283 nt3.16□□□□□ -1.9
NRD1P53617 RPL25YOL127W 429 nt3.16□□□□□ -1.9
NRD1P53617 FRE8YLR047C 2061 nt3.16□□□□□ -1.9
NRD1P53617 NTO1YPR031W 2247 nt3.16□□□□□ -1.9
NRD1P53617 SGM1YJR134C 2124 nt3.16□□□□□ -1.9
NRD1P53617 YPK1YKL126W 2043 nt3.15□□□□□ -1.9
NRD1P53617 GCN1YGL195W 8019 nt3.15□□□□□ -1.91
NRD1P53617 RPL31AYDL075W 342 nt3.14□□□□□ -1.91 RIP-Chip
NRD1P53617 YKL096C-BYKL096C-B 150 nt3.14□□□□□ -1.91
NRD1P53617 CFT2YLR115W 2580 nt3.14□□□□□ -1.91
NRD1P53617 PEP3YLR148W 2757 nt3.14□□□□□ -1.91
NRD1P53617 YJL181WYJL181W 1836 nt3.14□□□□□ -1.91
NRD1P53617 FLO5YHR211W 3228 nt3.14□□□□□ -1.91
NRD1P53617 KAP95YLR347C 2586 nt3.13□□□□□ -1.91
NRD1P53617 EPL1YFL024C 2499 nt3.13□□□□□ -1.91
NRD1P53617 SLP1YOR154W 1764 nt3.13□□□□□ -1.91
NRD1P53617 YDL196WYDL196W 330 nt3.13□□□□□ -1.91
NRD1P53617 QCR7YDR529C 384 nt3.13□□□□□ -1.91
NRD1P53617 YER039C-AYER039C-A 219 nt3.13□□□□□ -1.91
NRD1P53617 YGL069CYGL069C 465 nt3.13□□□□□ -1.91
NRD1P53617 YAL064W-BYAL064W-B 381 nt3.13□□□□□ -1.91
NRD1P53617 YMR175W-AYMR175W-A 195 nt3.13□□□□□ -1.91
NRD1P53617 ATG13YPR185W 2217 nt3.13□□□□□ -1.91
NRD1P53617 INP2YMR163C 2118 nt3.13□□□□□ -1.91
NRD1P53617 STT4YLR305C 5703 nt3.12□□□□□ -1.91
NRD1P53617 CPA2YJR109C 3357 nt3.12□□□□□ -1.91
NRD1P53617 STE23YLR389C 3084 nt3.12□□□□□ -1.91 RIP-Chip
NRD1P53617 APL1YJR005W 2103 nt3.12□□□□□ -1.91
NRD1P53617 SNU114YKL173W 3027 nt3.12□□□□□ -1.91
NRD1P53617 FAA2YER015W 2235 nt3.12□□□□□ -1.91
NRD1P53617 SIZ1YDR409W 2715 nt3.12□□□□□ -1.91
NRD1P53617 NCA2YPR155C 1851 nt3.11□□□□□ -1.91
NRD1P53617 CAF130YGR134W 3369 nt3.11□□□□□ -1.91
NRD1P53617 CHO2YGR157W 2610 nt3.1□□□□□ -1.91
NRD1P53617 DYN2YDR424C 279 nt3.1□□□□□ -1.91 RIP-Chip
NRD1P53617 TIM12YBR091C 330 nt3.1□□□□□ -1.91
NRD1P53617 SLM2YNL047C 1971 nt3.1□□□□□ -1.91
NRD1P53617 SQS1YNL224C 2304 nt3.1□□□□□ -1.91
NRD1P53617 YSP2YDR326C 4317 nt3.1□□□□□ -1.91
NRD1P53617 COG3YER157W 2406 nt3.09□□□□□ -1.91
NRD1P53617 PTC5YOR090C 1719 nt3.09□□□□□ -1.91 RIP-Chip
NRD1P53617 KAP104YBR017C 2757 nt3.09□□□□□ -1.92
NRD1P53617 YDR089WYDR089W 2610 nt3.08□□□□□ -1.92
NRD1P53617 DOA4YDR069C 2781 nt3.08□□□□□ -1.92
NRD1P53617 RPS26AYGL189C 360 nt3.08□□□□□ -1.92
NRD1P53617 YGR050CYGR050C 357 nt3.08□□□□□ -1.92
NRD1P53617 NMD2YHR077C 3270 nt3.08□□□□□ -1.92
NRD1P53617 RIX1YHR197W 2292 nt3.08□□□□□ -1.92
NRD1P53617 ELG1YOR144C 2376 nt3.08□□□□□ -1.92
NRD1P53617 RPN1YHR027C 2982 nt3.07□□□□□ -1.92
NRD1P53617 IOC3YFR013W 2364 nt3.07□□□□□ -1.92
NRD1P53617 YIL058WYIL058W 285 nt3.06□□□□□ -1.92
NRD1P53617 RCY1YJL204C 2523 nt3.06□□□□□ -1.92
NRD1P53617 YLL019W-AYLL019W-A 93 nt3.06□□□□□ -1.92
NRD1P53617 YMR324CYMR324C 243 nt3.06□□□□□ -1.92
NRD1P53617 YBL071C-BYBL071C-B 99 nt3.06□□□□□ -1.92
NRD1P53617 FIG4YNL325C 2640 nt3.06□□□□□ -1.92
NRD1P53617 snR50snR50 90 nt3.06□□□□□ -1.92
NRD1P53617 FLO10YKR102W 3510 nt3.06□□□□□ -1.92
NRD1P53617 VIP1YLR410W 3441 nt3.06□□□□□ -1.92 RIP-Chip
NRD1P53617 CHS2YBR038W 2892 nt3.06□□□□□ -1.92
NRD1P53617 EFR3YMR212C 2349 nt3.05□□□□□ -1.92 RIP-Chip
NRD1P53617 GLG1YKR058W 1851 nt3.05□□□□□ -1.92
NRD1P53617 snR64snR64 101 nt3.05□□□□□ -1.92
NRD1P53617 TRZ1YKR079C 2517 nt3.05□□□□□ -1.92
NRD1P53617 ERB1YMR049C 2424 nt3.04□□□□□ -1.92
NRD1P53617 FAS1YKL182W 6156 nt3.04□□□□□ -1.92
NRD1P53617 YLR149CYLR149C 2193 nt3.04□□□□□ -1.92
NRD1P53617 MDM1YML104C 3384 nt3.04□□□□□ -1.92
NRD1P53617 YOR296WYOR296W 3870 nt3.04□□□□□ -1.92
NRD1P53617 YCR102W-AYCR102W-A 198 nt3.04□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 60 ms