Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LHX2P50458 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
LHX2P50458 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LHX2P50458 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX2P50458 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LHX2P50458 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.15■□□□□ 0.5
LHX2P50458 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX2P50458 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LHX2P50458 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LHX2P50458 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LHX2P50458 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LHX2P50458 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.14■□□□□ 0.5
LHX2P50458 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.14■□□□□ 0.5
LHX2P50458 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX2P50458 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX2P50458 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.14■□□□□ 0.49
LHX2P50458 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX2P50458 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.14■□□□□ 0.49
LHX2P50458 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX2P50458 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.14■□□□□ 0.49
LHX2P50458 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LHX2P50458 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.14■□□□□ 0.49
LHX2P50458 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.14■□□□□ 0.49
LHX2P50458 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.14■□□□□ 0.49
LHX2P50458 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.14■□□□□ 0.49
LHX2P50458 AC073648.6-201ENST00000641589 218 ntBASIC18.14■□□□□ 0.49
LHX2P50458 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LHX2P50458 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LHX2P50458 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LHX2P50458 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.14■□□□□ 0.49
LHX2P50458 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX2P50458 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.14■□□□□ 0.49
LHX2P50458 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX2P50458 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX2P50458 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX2P50458 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LHX2P50458 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.13■□□□□ 0.49
LHX2P50458 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.13■□□□□ 0.49
LHX2P50458 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.13■□□□□ 0.49
LHX2P50458 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LHX2P50458 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LHX2P50458 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.13■□□□□ 0.49
LHX2P50458 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX2P50458 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.13■□□□□ 0.49
LHX2P50458 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.13■□□□□ 0.49
LHX2P50458 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.13■□□□□ 0.49
LHX2P50458 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.13■□□□□ 0.49
LHX2P50458 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LHX2P50458 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LHX2P50458 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LHX2P50458 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX2P50458 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LHX2P50458 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.13■□□□□ 0.49
LHX2P50458 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX2P50458 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.13■□□□□ 0.49
LHX2P50458 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LHX2P50458 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.12■□□□□ 0.49
LHX2P50458 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.12■□□□□ 0.49
LHX2P50458 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.12■□□□□ 0.49
LHX2P50458 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.12■□□□□ 0.49
LHX2P50458 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.12■□□□□ 0.49
LHX2P50458 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LHX2P50458 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 AL390719.1-204ENST00000412397 1219 ntBASIC18.12■□□□□ 0.49
LHX2P50458 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LHX2P50458 AC008687.6-201ENST00000596318 630 ntBASIC18.12■□□□□ 0.49
LHX2P50458 AC006557.6-201ENST00000623071 864 ntBASIC18.12■□□□□ 0.49
LHX2P50458 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
LHX2P50458 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LHX2P50458 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX2P50458 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.11■□□□□ 0.49
LHX2P50458 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.11■□□□□ 0.49
LHX2P50458 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 AC023632.3-201ENST00000521633 145 ntBASIC18.11■□□□□ 0.49
LHX2P50458 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.11■□□□□ 0.49
LHX2P50458 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LHX2P50458 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.11■□□□□ 0.49
LHX2P50458 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
LHX2P50458 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms