Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 FIG4YNL325C 2640 nt4.42□□□□□ -1.7
RTG3P38165 CDC31YOR257W 486 nt4.42□□□□□ -1.7
RTG3P38165 APL5YPL195W 2799 nt4.42□□□□□ -1.7
RTG3P38165 NOC3YLR002C 1992 nt4.42□□□□□ -1.7
RTG3P38165 HOS3YPL116W 2094 nt4.41□□□□□ -1.7
RTG3P38165 TCO89YPL180W 2400 nt4.41□□□□□ -1.7
RTG3P38165 CTF4YPR135W 2784 nt4.41□□□□□ -1.7
RTG3P38165 NIP100YPL174C 2607 nt4.41□□□□□ -1.7
RTG3P38165 YLR146W-AYLR146W-A 189 nt4.41□□□□□ -1.7
RTG3P38165 snR43snR43 209 nt4.41□□□□□ -1.7
RTG3P38165 GLC3YEL011W 2115 nt4.4□□□□□ -1.7
RTG3P38165 PFF1YBR074W 2931 nt4.4□□□□□ -1.7
RTG3P38165 MPH1YIR002C 2982 nt4.4□□□□□ -1.7
RTG3P38165 MET10YFR030W 3108 nt4.39□□□□□ -1.71
RTG3P38165 AKR1YDR264C 2295 nt4.39□□□□□ -1.71
RTG3P38165 TOP1YOL006C 2310 nt4.39□□□□□ -1.71
RTG3P38165 PHD1YKL043W 1101 nt4.39□□□□□ -1.71
RTG3P38165 FAR1YJL157C 2493 nt4.39□□□□□ -1.71
RTG3P38165 APL4YPR029C 2499 nt4.39□□□□□ -1.71
RTG3P38165 PXA2YKL188C 2562 nt4.39□□□□□ -1.71
RTG3P38165 PRP22YER013W 3438 nt4.39□□□□□ -1.71
RTG3P38165 YLR149CYLR149C 2193 nt4.38□□□□□ -1.71
RTG3P38165 YER039C-AYER039C-A 219 nt4.38□□□□□ -1.71
RTG3P38165 YGL014C-AYGL014C-A 162 nt4.38□□□□□ -1.71
RTG3P38165 YLL019W-AYLL019W-A 93 nt4.38□□□□□ -1.71
RTG3P38165 ATG13YPR185W 2217 nt4.38□□□□□ -1.71
RTG3P38165 GSC2YGR032W 5688 nt4.38□□□□□ -1.71
RTG3P38165 GRR1YJR090C 3456 nt4.37□□□□□ -1.71
RTG3P38165 NTO1YPR031W 2247 nt4.37□□□□□ -1.71
RTG3P38165 POM152YMR129W 4014 nt4.37□□□□□ -1.71
RTG3P38165 YCR087C-AYCR087C-A 462 nt4.37□□□□□ -1.71
RTG3P38165 YDL118WYDL118W 381 nt4.37□□□□□ -1.71
RTG3P38165 tC(GCA)BtC(GCA)B 72 nt4.36□□□□□ -1.71
RTG3P38165 tC(GCA)GtC(GCA)G 72 nt4.36□□□□□ -1.71
RTG3P38165 tC(GCA)P1tC(GCA)P1 72 nt4.36□□□□□ -1.71
RTG3P38165 tC(GCA)P2tC(GCA)P2 72 nt4.36□□□□□ -1.71
RTG3P38165 NOP4YPL043W 2058 nt4.36□□□□□ -1.71
RTG3P38165 SPC98YNL126W 2541 nt4.35□□□□□ -1.71
RTG3P38165 VPS35YJL154C 2835 nt4.35□□□□□ -1.71
RTG3P38165 YDL025W-AYDL025W-A 105 nt4.35□□□□□ -1.71
RTG3P38165 PAU10YDR542W 363 nt4.35□□□□□ -1.71
RTG3P38165 PAU11YGL261C 363 nt4.35□□□□□ -1.71
RTG3P38165 PAU4YLR461W 363 nt4.35□□□□□ -1.71
RTG3P38165 PSK2YOL045W 3306 nt4.35□□□□□ -1.71
RTG3P38165 SEC15YGL233W 2733 nt4.33□□□□□ -1.72
RTG3P38165 VBA4YDR119W 2307 nt4.33□□□□□ -1.72
RTG3P38165 YOR019WYOR019W 2193 nt4.33□□□□□ -1.72
RTG3P38165 tV(CAC)DtV(CAC)D 73 nt4.33□□□□□ -1.72
RTG3P38165 tV(CAC)HtV(CAC)H 73 nt4.33□□□□□ -1.72
RTG3P38165 YPR108W-AYPR108W-A 213 nt4.33□□□□□ -1.72
RTG3P38165 YDR034C-DYDR034C-D 5313 nt4.33□□□□□ -1.72
RTG3P38165 RPA135YPR010C 3612 nt4.33□□□□□ -1.72
RTG3P38165 HOS4YIL112W 3252 nt4.33□□□□□ -1.72
RTG3P38165 SEF1YBL066C 3447 nt4.32□□□□□ -1.72
RTG3P38165 tK(UUU)DtK(UUU)D 73 nt4.32□□□□□ -1.72
RTG3P38165 tK(UUU)G1tK(UUU)G1 73 nt4.32□□□□□ -1.72
RTG3P38165 tK(UUU)G2tK(UUU)G2 73 nt4.32□□□□□ -1.72
RTG3P38165 tK(UUU)KtK(UUU)K 73 nt4.32□□□□□ -1.72
RTG3P38165 tK(UUU)LtK(UUU)L 73 nt4.32□□□□□ -1.72
RTG3P38165 tK(UUU)OtK(UUU)O 73 nt4.32□□□□□ -1.72
RTG3P38165 tK(UUU)PtK(UUU)P 73 nt4.32□□□□□ -1.72
RTG3P38165 YJL120WYJL120W 324 nt4.32□□□□□ -1.72
RTG3P38165 YBL012CYBL012C 402 nt4.32□□□□□ -1.72
RTG3P38165 MSC6YOR354C 2079 nt4.32□□□□□ -1.72
RTG3P38165 ERB1YMR049C 2424 nt4.32□□□□□ -1.72
RTG3P38165 FLO10YKR102W 3510 nt4.32□□□□□ -1.72
RTG3P38165 SWI6YLR182W 2412 nt4.31□□□□□ -1.72
RTG3P38165 RPN2YIL075C 2838 nt4.31□□□□□ -1.72
RTG3P38165 RPO31YOR116C 4383 nt4.31□□□□□ -1.72
RTG3P38165 AIM44YPL158C 2277 nt4.3□□□□□ -1.72
RTG3P38165 YGL140CYGL140C 3660 nt4.3□□□□□ -1.72
RTG3P38165 TMA108YIL137C 2841 nt4.3□□□□□ -1.72
RTG3P38165 RPL31AYDL075W 342 nt4.3□□□□□ -1.72
RTG3P38165 RPS25BYLR333C 327 nt4.3□□□□□ -1.72
RTG3P38165 YFR016CYFR016C 3702 nt4.3□□□□□ -1.72
RTG3P38165 TAF6YGL112C 1551 nt4.3□□□□□ -1.72
RTG3P38165 YNL144CYNL144C 2223 nt4.3□□□□□ -1.72
RTG3P38165 ULS1YOR191W 4860 nt4.3□□□□□ -1.72
RTG3P38165 NPR3YHL023C 3441 nt4.28□□□□□ -1.72
RTG3P38165 YCR043CYCR043C 384 nt4.28□□□□□ -1.72
RTG3P38165 YDL242WYDL242W 354 nt4.28□□□□□ -1.72
RTG3P38165 DAN4YJR151C 3486 nt4.28□□□□□ -1.72
RTG3P38165 GIS1YDR096W 2685 nt4.28□□□□□ -1.73
RTG3P38165 ITC1YGL133W 3795 nt4.27□□□□□ -1.73
RTG3P38165 PBY1YBR094W 2262 nt4.27□□□□□ -1.73
RTG3P38165 FAP7YDL166C 594 nt4.27□□□□□ -1.73
RTG3P38165 FMP16YDR070C 282 nt4.27□□□□□ -1.73
RTG3P38165 YHR032W-AYHR032W-A 180 nt4.27□□□□□ -1.73
RTG3P38165 ORC1YML065W 2745 nt4.26□□□□□ -1.73
RTG3P38165 VPS3YDR495C 3036 nt4.26□□□□□ -1.73
RTG3P38165 SWI1YPL016W 3945 nt4.26□□□□□ -1.73
RTG3P38165 XRN1YGL173C 4587 nt4.26□□□□□ -1.73
RTG3P38165 MDV1YJL112W 2145 nt4.25□□□□□ -1.73
RTG3P38165 PAU3YCR104W 375 nt4.25□□□□□ -1.73
RTG3P38165 SLY1YDR189W 2001 nt4.25□□□□□ -1.73
RTG3P38165 SPT23YKL020C 3249 nt4.25□□□□□ -1.73
RTG3P38165 BOI1YBL085W 2943 nt4.25□□□□□ -1.73
RTG3P38165 REC8YPR007C 2043 nt4.25□□□□□ -1.73
RTG3P38165 RPH1YER169W 2391 nt4.25□□□□□ -1.73
RTG3P38165 PKH1YDR490C 2301 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 25.9 ms