Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGCLP35914 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGCLP35914 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLP35914 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLP35914 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLP35914 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCLP35914 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HMGCLP35914 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLP35914 AC092667.1-201ENST00000434301 2586 ntBASIC20.21■□□□□ 0.83
HMGCLP35914 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLP35914 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLP35914 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLP35914 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HMGCLP35914 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.21■□□□□ 0.83
HMGCLP35914 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCLP35914 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
HMGCLP35914 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCLP35914 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCLP35914 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLP35914 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLP35914 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.21■□□□□ 0.83
HMGCLP35914 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.21■□□□□ 0.83
HMGCLP35914 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.21■□□□□ 0.83
HMGCLP35914 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCLP35914 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLP35914 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.2■□□□□ 0.82
HMGCLP35914 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 DUSP5P2-201ENST00000426873 1033 ntBASIC20.2■□□□□ 0.82
HMGCLP35914 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.2■□□□□ 0.82
HMGCLP35914 AC091874.3-201ENST00000512672 1195 ntBASIC20.2■□□□□ 0.82
HMGCLP35914 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.2■□□□□ 0.82
HMGCLP35914 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGCLP35914 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLP35914 LINC01521-201ENST00000504184 1943 ntBASIC20.19■□□□□ 0.82
HMGCLP35914 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCLP35914 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLP35914 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLP35914 AC069152.1-201ENST00000438030 544 ntBASIC20.19■□□□□ 0.82
HMGCLP35914 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.19■□□□□ 0.82
HMGCLP35914 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.19■□□□□ 0.82
HMGCLP35914 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
HMGCLP35914 AC133041.1-202ENST00000642053 222 ntBASIC20.19■□□□□ 0.82
HMGCLP35914 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCLP35914 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLP35914 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCLP35914 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCLP35914 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLP35914 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLP35914 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.19■□□□□ 0.82
HMGCLP35914 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCLP35914 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLP35914 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLP35914 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLP35914 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HMGCLP35914 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLP35914 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.18■□□□□ 0.82
HMGCLP35914 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLP35914 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.18■□□□□ 0.82
HMGCLP35914 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HMGCLP35914 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 MYC-209ENST00000641252 345 ntBASIC20.18■□□□□ 0.82
HMGCLP35914 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HMGCLP35914 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGCLP35914 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLP35914 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 DPP3P2-201ENST00000416030 1696 ntBASIC20.17■□□□□ 0.82
HMGCLP35914 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 AL162377.1-201ENST00000618844 1793 ntBASIC20.17■□□□□ 0.82
HMGCLP35914 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HMGCLP35914 AL355802.2-201ENST00000402069 882 ntBASIC20.17■□□□□ 0.82
HMGCLP35914 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
HMGCLP35914 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCLP35914 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLP35914 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms