Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H1CP16403 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H1CP16403 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H1CP16403 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.17■□□□□ 0.5
HIST1H1CP16403 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H1CP16403 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.17■□□□□ 0.5
HIST1H1CP16403 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.17■□□□□ 0.5
HIST1H1CP16403 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HIST1H1CP16403 UBE2DNL-204ENST00000602536 740 ntBASIC18.17■□□□□ 0.5
HIST1H1CP16403 DPP3P2-201ENST00000416030 1696 ntBASIC18.17■□□□□ 0.5
HIST1H1CP16403 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H1CP16403 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.17■□□□□ 0.5
HIST1H1CP16403 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.17■□□□□ 0.5
HIST1H1CP16403 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.17■□□□□ 0.5
HIST1H1CP16403 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H1CP16403 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HIST1H1CP16403 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H1CP16403 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HIST1H1CP16403 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
HIST1H1CP16403 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.16■□□□□ 0.5
HIST1H1CP16403 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.16■□□□□ 0.5
HIST1H1CP16403 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.16■□□□□ 0.5
HIST1H1CP16403 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.16■□□□□ 0.5
HIST1H1CP16403 FAM21FP-204ENST00000608637 956 ntBASIC18.16■□□□□ 0.5
HIST1H1CP16403 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HIST1H1CP16403 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H1CP16403 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.16■□□□□ 0.5
HIST1H1CP16403 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.16■□□□□ 0.5
HIST1H1CP16403 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HIST1H1CP16403 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 CDV3P1-201ENST00000471403 739 ntBASIC18.15■□□□□ 0.5
HIST1H1CP16403 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.15■□□□□ 0.5
HIST1H1CP16403 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST1H1CP16403 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HIST1H1CP16403 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HIST1H1CP16403 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HIST1H1CP16403 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.14■□□□□ 0.5
HIST1H1CP16403 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST1H1CP16403 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST1H1CP16403 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.13■□□□□ 0.49
HIST1H1CP16403 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST1H1CP16403 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.13■□□□□ 0.49
HIST1H1CP16403 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
HIST1H1CP16403 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST1H1CP16403 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST1H1CP16403 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.13■□□□□ 0.49
HIST1H1CP16403 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST1H1CP16403 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.13■□□□□ 0.49
HIST1H1CP16403 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
HIST1H1CP16403 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.13■□□□□ 0.49
HIST1H1CP16403 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST1H1CP16403 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HIST1H1CP16403 MYCNOS-205ENST00000641950 531 ntBASIC18.13■□□□□ 0.49
HIST1H1CP16403 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST1H1CP16403 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms