Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 Z98882.1-201ENST00000622160 2253 ntBASIC19.23■□□□□ 0.67
CCL4P13236 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 AC124283.5-201ENST00000624661 1809 ntBASIC19.23■□□□□ 0.67
CCL4P13236 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 FBXW4P1-201ENST00000426721 2239 ntBASIC19.23■□□□□ 0.67
CCL4P13236 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCL4P13236 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL4P13236 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.22■□□□□ 0.67
CCL4P13236 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL4P13236 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL4P13236 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.22■□□□□ 0.67
CCL4P13236 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.22■□□□□ 0.67
CCL4P13236 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL4P13236 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.22■□□□□ 0.67
CCL4P13236 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.22■□□□□ 0.67
CCL4P13236 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.22■□□□□ 0.67
CCL4P13236 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.22■□□□□ 0.67
CCL4P13236 MIR4785-201ENST00000585005 73 ntBASIC19.22■□□□□ 0.67
CCL4P13236 LINC01023-201ENST00000606054 436 ntBASIC19.22■□□□□ 0.67
CCL4P13236 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCL4P13236 KRT8P36-201ENST00000489121 1440 ntBASIC19.22■□□□□ 0.67
CCL4P13236 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.22■□□□□ 0.67
CCL4P13236 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL4P13236 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.22■□□□□ 0.67
CCL4P13236 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL4P13236 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL4P13236 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL4P13236 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL4P13236 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCL4P13236 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL4P13236 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.21■□□□□ 0.67
CCL4P13236 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCL4P13236 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCL4P13236 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCL4P13236 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCL4P13236 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL4P13236 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL4P13236 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL4P13236 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL4P13236 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL4P13236 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCL4P13236 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.2■□□□□ 0.66
CCL4P13236 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 FAM210CP-201ENST00000445714 574 ntBASIC19.2■□□□□ 0.66
CCL4P13236 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL4P13236 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.2■□□□□ 0.66
CCL4P13236 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL4P13236 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL4P13236 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.2■□□□□ 0.66
CCL4P13236 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.2■□□□□ 0.66
CCL4P13236 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.2■□□□□ 0.66
CCL4P13236 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.2■□□□□ 0.66
CCL4P13236 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.2■□□□□ 0.66
CCL4P13236 MIR2861-201ENST00000636310 90 ntBASIC19.2■□□□□ 0.66
CCL4P13236 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CCL4P13236 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCL4P13236 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL4P13236 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCL4P13236 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL4P13236 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL4P13236 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL4P13236 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCL4P13236 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.19■□□□□ 0.66
CCL4P13236 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL4P13236 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCL4P13236 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL4P13236 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL4P13236 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.19■□□□□ 0.66
CCL4P13236 AC023632.3-201ENST00000521633 145 ntBASIC19.19■□□□□ 0.66
CCL4P13236 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.19■□□□□ 0.66
CCL4P13236 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.19■□□□□ 0.66
CCL4P13236 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.19■□□□□ 0.66
CCL4P13236 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCL4P13236 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL4P13236 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL4P13236 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCL4P13236 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL4P13236 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL4P13236 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.18■□□□□ 0.66
CCL4P13236 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL4P13236 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL4P13236 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
CCL4P13236 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL4P13236 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms