Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LCATP04180 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCATP04180 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCATP04180 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.7■□□□□ 0.42
LCATP04180 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCATP04180 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.7■□□□□ 0.42
LCATP04180 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.69■□□□□ 0.42
LCATP04180 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.69■□□□□ 0.42
LCATP04180 DUX4L16-201ENST00000555130 1264 ntBASIC17.69■□□□□ 0.42
LCATP04180 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.69■□□□□ 0.42
LCATP04180 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.69■□□□□ 0.42
LCATP04180 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.69■□□□□ 0.42
LCATP04180 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.69■□□□□ 0.42
LCATP04180 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.69■□□□□ 0.42
LCATP04180 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCATP04180 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.68■□□□□ 0.42
LCATP04180 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LCATP04180 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
LCATP04180 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.68■□□□□ 0.42
LCATP04180 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.68■□□□□ 0.42
LCATP04180 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.68■□□□□ 0.42
LCATP04180 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.68■□□□□ 0.42
LCATP04180 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LCATP04180 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LCATP04180 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.68■□□□□ 0.42
LCATP04180 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LCATP04180 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LCATP04180 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
LCATP04180 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LCATP04180 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
LCATP04180 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LCATP04180 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.67■□□□□ 0.42
LCATP04180 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.67■□□□□ 0.42
LCATP04180 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LCATP04180 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.67■□□□□ 0.42
LCATP04180 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LCATP04180 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 PGM5P4-201ENST00000421970 445 ntBASIC17.67■□□□□ 0.42
LCATP04180 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.67■□□□□ 0.42
LCATP04180 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.67■□□□□ 0.42
LCATP04180 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.67■□□□□ 0.42
LCATP04180 AL162412.1-201ENST00000567129 965 ntBASIC17.67■□□□□ 0.42
LCATP04180 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 AC016405.3-201ENST00000607710 860 ntBASIC17.67■□□□□ 0.42
LCATP04180 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.67■□□□□ 0.42
LCATP04180 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LCATP04180 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.67■□□□□ 0.42
LCATP04180 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.67■□□□□ 0.42
LCATP04180 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCATP04180 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.67■□□□□ 0.42
LCATP04180 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCATP04180 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LCATP04180 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCATP04180 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCATP04180 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCATP04180 KRT8P36-201ENST00000489121 1440 ntBASIC17.66■□□□□ 0.42
LCATP04180 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCATP04180 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCATP04180 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.66■□□□□ 0.42
LCATP04180 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
LCATP04180 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
LCATP04180 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms