Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.9■□□□□ 0.94
TSPAN3O60637 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN3O60637 PRORSD1P-201ENST00000295112 541 ntBASIC20.9■□□□□ 0.94
TSPAN3O60637 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN3O60637 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.9■□□□□ 0.94
TSPAN3O60637 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.9■□□□□ 0.94
TSPAN3O60637 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.9■□□□□ 0.94
TSPAN3O60637 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.9■□□□□ 0.94
TSPAN3O60637 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.9■□□□□ 0.94
TSPAN3O60637 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN3O60637 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.9■□□□□ 0.94
TSPAN3O60637 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.9■□□□□ 0.94
TSPAN3O60637 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.9■□□□□ 0.94
TSPAN3O60637 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.9■□□□□ 0.94
TSPAN3O60637 AC008687.6-201ENST00000596318 630 ntBASIC20.9■□□□□ 0.94
TSPAN3O60637 AC008403.3-201ENST00000598924 454 ntBASIC20.9■□□□□ 0.94
TSPAN3O60637 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TSPAN3O60637 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.9■□□□□ 0.94
TSPAN3O60637 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.9■□□□□ 0.94
TSPAN3O60637 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
TSPAN3O60637 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
TSPAN3O60637 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN3O60637 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN3O60637 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN3O60637 AC006128.1-201ENST00000624704 1661 ntBASIC20.89■□□□□ 0.94
TSPAN3O60637 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TSPAN3O60637 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TSPAN3O60637 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TSPAN3O60637 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
TSPAN3O60637 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TSPAN3O60637 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.89■□□□□ 0.94
TSPAN3O60637 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TSPAN3O60637 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TSPAN3O60637 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN3O60637 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN3O60637 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TSPAN3O60637 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TSPAN3O60637 AC128676.1-201ENST00000454392 318 ntBASIC20.89■□□□□ 0.93
TSPAN3O60637 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
TSPAN3O60637 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.89■□□□□ 0.93
TSPAN3O60637 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN3O60637 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.89■□□□□ 0.93
TSPAN3O60637 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN3O60637 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN3O60637 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN3O60637 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TSPAN3O60637 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TSPAN3O60637 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN3O60637 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TSPAN3O60637 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN3O60637 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.88■□□□□ 0.93
TSPAN3O60637 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN3O60637 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN3O60637 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TSPAN3O60637 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN3O60637 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN3O60637 UNC93B4-201ENST00000505679 747 ntBASIC20.88■□□□□ 0.93
TSPAN3O60637 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TSPAN3O60637 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.88■□□□□ 0.93
TSPAN3O60637 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.88■□□□□ 0.93
TSPAN3O60637 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN3O60637 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.88■□□□□ 0.93
TSPAN3O60637 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.88■□□□□ 0.93
TSPAN3O60637 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.87■□□□□ 0.93
TSPAN3O60637 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.87■□□□□ 0.93
TSPAN3O60637 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.87■□□□□ 0.93
TSPAN3O60637 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TSPAN3O60637 AC006557.6-201ENST00000623071 864 ntBASIC20.87■□□□□ 0.93
TSPAN3O60637 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN3O60637 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.87■□□□□ 0.93
TSPAN3O60637 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TSPAN3O60637 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TSPAN3O60637 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TSPAN3O60637 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.86■□□□□ 0.93
TSPAN3O60637 AC073648.6-201ENST00000641589 218 ntBASIC20.86■□□□□ 0.93
TSPAN3O60637 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.86■□□□□ 0.93
TSPAN3O60637 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN3O60637 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.86■□□□□ 0.93
TSPAN3O60637 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN3O60637 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.85■□□□□ 0.93
TSPAN3O60637 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TSPAN3O60637 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms