Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDH7O60245 PGM5P4-201ENST00000421970 445 ntBASIC19.35■□□□□ 0.69
PCDH7O60245 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH7O60245 AL162430.1-201ENST00000480705 870 ntBASIC19.35■□□□□ 0.69
PCDH7O60245 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH7O60245 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDH7O60245 AL162412.1-201ENST00000567129 965 ntBASIC19.35■□□□□ 0.69
PCDH7O60245 AC016405.3-201ENST00000607710 860 ntBASIC19.35■□□□□ 0.69
PCDH7O60245 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDH7O60245 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDH7O60245 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDH7O60245 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PCDH7O60245 AC112907.3-201ENST00000577781 2400 ntBASIC19.34■□□□□ 0.69
PCDH7O60245 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDH7O60245 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PCDH7O60245 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDH7O60245 AC006015.1-201ENST00000429970 570 ntBASIC19.34■□□□□ 0.69
PCDH7O60245 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDH7O60245 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH7O60245 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDH7O60245 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDH7O60245 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH7O60245 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDH7O60245 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 AC087633.2-202ENST00000565166 1439 ntBASIC19.34■□□□□ 0.69
PCDH7O60245 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH7O60245 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH7O60245 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDH7O60245 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PCDH7O60245 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH7O60245 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.69
PCDH7O60245 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH7O60245 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH7O60245 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH7O60245 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDH7O60245 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PCDH7O60245 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PCDH7O60245 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH7O60245 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH7O60245 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDH7O60245 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH7O60245 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.33■□□□□ 0.68
PCDH7O60245 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDH7O60245 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH7O60245 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH7O60245 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PCDH7O60245 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH7O60245 CYP21A1P-202ENST00000354927 1481 ntBASIC19.33■□□□□ 0.68
PCDH7O60245 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH7O60245 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH7O60245 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH7O60245 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH7O60245 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH7O60245 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH7O60245 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCDH7O60245 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH7O60245 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH7O60245 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 DUX4L16-201ENST00000555130 1264 ntBASIC19.32■□□□□ 0.68
PCDH7O60245 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH7O60245 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDH7O60245 AL356652.1-201ENST00000615962 565 ntBASIC19.32■□□□□ 0.68
PCDH7O60245 AC011767.1-201ENST00000617410 1153 ntBASIC19.32■□□□□ 0.68
PCDH7O60245 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 DPP3P2-201ENST00000416030 1696 ntBASIC19.32■□□□□ 0.68
PCDH7O60245 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH7O60245 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDH7O60245 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH7O60245 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH7O60245 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms