Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 AL390719.1-204ENST00000412397 1219 ntBASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 AC120498.8-201ENST00000614275 531 ntBASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 AL158047.1-201ENST00000445918 881 ntBASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 AC069544.1-201ENST00000609399 999 ntBASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM28A0A1B0GU29 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 AC023632.3-201ENST00000521633 145 ntBASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 RN7SL471P-201ENST00000580476 299 ntBASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM28A0A1B0GU29 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 AC007225.1-201ENST00000566331 1836 ntBASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.78■■□□□ 1.08
SMIM28A0A1B0GU29 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SMIM28A0A1B0GU29 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SMIM28A0A1B0GU29 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.77■■□□□ 1.07
SMIM28A0A1B0GU29 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM28A0A1B0GU29 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM28A0A1B0GU29 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SMIM28A0A1B0GU29 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms