Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SLC1A1P43005 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
SLC1A1P43005 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC8.57□□□□□ -1.04
SLC1A1P43005 AL353754.1-201ENST00000440219 340 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 AC010099.2-201ENST00000443177 373 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 TSSK1A-201ENST00000450724 768 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 AC114964.1-201ENST00000502306 1111 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SLC1A1P43005 AC091982.1-201ENST00000518134 520 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 IGLV3-7-201ENST00000522952 271 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 HNRNPA1P38-201ENST00000523612 957 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC8.57□□□□□ -1.04
SLC1A1P43005 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC8.57□□□□□ -1.04
SLC1A1P43005 LINC02327-206ENST00000551588 885 ntTSL 5 BASIC8.57□□□□□ -1.04
SLC1A1P43005 AC104046.1-201ENST00000559487 406 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 RN7SL804P-201ENST00000582466 298 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 MIR4450-201ENST00000583589 65 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 EIF5AP3-201ENST00000589460 462 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 AP005131.4-202ENST00000590468 570 ntTSL 4 BASIC8.57□□□□□ -1.04
SLC1A1P43005 INTS6-AS1-204ENST00000593709 648 ntTSL 5 BASIC8.57□□□□□ -1.04
SLC1A1P43005 VDAC1P5-201ENST00000603132 844 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 AC112187.3-201ENST00000607844 408 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SLC1A1P43005 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SLC1A1P43005 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
SLC1A1P43005 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SLC1A1P43005 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SLC1A1P43005 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SLC1A1P43005 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SLC1A1P43005 AC098614.1-202ENST00000634895 1830 ntBASIC8.57□□□□□ -1.04
SLC1A1P43005 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SLC1A1P43005 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
SLC1A1P43005 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 SNORA30-201ENST00000384028 129 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 RNU1-8P-201ENST00000384328 165 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 VN2R10P-201ENST00000411871 853 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 LYPLA2P3-201ENST00000417429 576 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 AL031733.1-201ENST00000422817 455 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 SEPHS1P1-201ENST00000426891 958 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 ASS1P5-201ENST00000435496 1239 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 AC012501.2-201ENST00000437634 1281 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 RN7SL146P-201ENST00000472338 297 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 RN7SL135P-201ENST00000490144 278 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 AC106868.1-201ENST00000505272 992 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 LINC02505-201ENST00000505298 788 ntTSL 5 BASIC8.56□□□□□ -1.04
SLC1A1P43005 PDPN-209ENST00000510906 786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC8.56□□□□□ -1.04
SLC1A1P43005 AC019209.1-201ENST00000544399 486 ntTSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.56□□□□□ -1.04
SLC1A1P43005 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC8.56□□□□□ -1.04
SLC1A1P43005 ZNF771-203ENST00000564550 1187 ntTSL 5 BASIC8.56□□□□□ -1.04
SLC1A1P43005 AC005552.1-201ENST00000577556 662 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 AP000590.1-201ENST00000624943 464 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC8.56□□□□□ -1.04
SLC1A1P43005 AC007326.3-201ENST00000636418 176 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
SLC1A1P43005 AC016582.1-202ENST00000636341 2982 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 AC022150.4-201ENST00000598322 2848 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 HERC2P5-201ENST00000562687 3825 ntBASIC8.56□□□□□ -1.04
SLC1A1P43005 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
SLC1A1P43005 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SLC1A1P43005 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.55□□□□□ -1.04
SLC1A1P43005 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.55□□□□□ -1.04
SLC1A1P43005 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms